Transcript Information: S_Transcript_404818.p1


Annotated TAIR IDAT3G07880.1
Annotated Gene NameImmunoglobulin E-set superfamily protein
Annotated Gene Symbol(s)SCN1
Annotation TypeHomolog
Chromosome Positionchr3:2514175-2515544 | Forward length=240
E-Value9E-42
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10
Replicate 20
Replicate 30
Condition 2: 8 Hour
Replicate 10.40427280222053
Replicate 20.95424946804521
Replicate 30
Condition 3: 24 Hour
Replicate 10.4141210140397
Replicate 20
Replicate 30.83675028832139


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_404818.p1 GENE.S_Transcript_404818~~S_Transcript_404818.p1 ORF type:5prime_partial len:211 (+),score=31.40,Rho_GDI|PF02115.13|1.1e-51 S_Transcript_404818:1-633(+)
ATTTCAGCTTTCAGTTCAACACTGTCAAACACAACATTTCTCTCCGAAAATTCCTCATCCTGTGTACTAATGACTGATTTTTTTTCTATTTTCTTCTTGTGTTTCTCTTCGGTAAAGGATTCTGTAATGAATGATGATGAAAGCTTAACCAATTGCAAGCAGCAAGAAGTTCCTGCAAGTATCGACACATCCGCTGTCAGAGAAAGCAAAGGACCAGAGGTGAAGATATTGAGCCTCACAGTTGTTTCTCCTGGCCGTCAAGATGTTGTGTTGCCAATTCCATTTCCTGCAACTACTTCCAAATCCACACTGTTTACCCTCAAGGAAGGAAGCAAATACCGAATCAAGTTTCATTTCACCGTGTCTAACAACACTGTTTCTGACCTCAAATACACCTACATGGTTTGGAAGGCTGGTGTCAGAGTACACCAGACAAAGAAGATGATGGGTGCATTCAGCCCGCGGCAAGAACCCTACATATTCGAACTAGAGGAAGGAACTACTCCTACAGGATTCTTTGCAAGAGGCCCTTTCTTGGTTAAATCTAAGTTTGTGGATGATGAAAACTGTTACTTAGATACCACTTACTACTTTGATATCAGAAAGGACTGGGGAGCTAAAGAAAAGTGTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_404818.p1 GENE.S_Transcript_404818~~S_Transcript_404818.p1 ORF type:5prime_partial len:211 (+),score=31.40,Rho_GDI|PF02115.13|1.1e-51 S_Transcript_404818:1-633(+)
ISAFSSTLSNTTFLSENSSSCVLMTDFFSIFFLCFSSVKDSVMNDDESLTNCKQQEVPASIDTSAVRESKGPEVKILSLTVVSPGRQDVVLPIPFPATTSKSTLFTLKEGSKYRIKFHFTVSNNTVSDLKYTYMVWKAGVRVHQTKKMMGAFSPRQEPYIFELEEGTTPTGFFARGPFLVKSKFVDDENCYLDTTYYFDIRKDWGAKEKC*

Click here to download the sequence:
Link to NCBI Protein BLAST