Transcript Information: S_Transcript_405029.p1


Annotated TAIR IDAT5G13340.1
Annotated Gene Nameunknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G10890.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:4277939-4279397 | Reverse length=242
E-Value3E-06
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 131.844616862609
Replicate 223.571356364866
Replicate 323.80216366345
Condition 2: 8 Hour
Replicate 140.828097701178
Replicate 233.270954387286
Replicate 330.607370919973
Condition 3: 24 Hour
Replicate 118.297423778446
Replicate 220.533025872588
Replicate 315.305685066353


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_405029.p1 GENE.S_Transcript_405029~~S_Transcript_405029.p1 ORF type:5prime_partial len:117 (-),score=48.57,ARGLU|PF15346.2|3.4e-23 S_Transcript_405029:229-579(-)
GAGGAAGGGCGGAAGAAATTATTTGATGATGTACTTGCCCAGCTTAAGAGAGAAAAGGAAAATGCTCTCATGGAGGCAAGGAAGAAGGAGGAACAAGCACGGAGAGAAAGAGAAGAGCTTGACAAGATGCTTGAAGAGAACCGAAGGAGGGTGGAAGAGGCTCAGAGAAAAGAAGCCCTGGAACTGCAGCGAAAATTGGAAGAACGGCAGAGAGAACTTGAGTTGATTCAACGACAAAAGGAAGAGGCTGCTAGAAGAAAGAAGCTCGAAGAGGAAGAGGAACGAGCGAATCAGATACTTTTAGGTAAAAATAAAGCTCGGCCAAAAGCACCTTCTGCTATAGGCCTATAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_405029.p1 GENE.S_Transcript_405029~~S_Transcript_405029.p1 ORF type:5prime_partial len:117 (-),score=48.57,ARGLU|PF15346.2|3.4e-23 S_Transcript_405029:229-579(-)
EEGRKKLFDDVLAQLKREKENALMEARKKEEQARREREELDKMLEENRRRVEEAQRKEALELQRKLEERQRELELIQRQKEEAARRKKLEEEEERANQILLGKNKARPKAPSAIGL*

Click here to download the sequence:
Link to NCBI Protein BLAST