Transcript Information: S_Transcript_40530.p1


Annotated TAIR IDAT5G08520.1
Annotated Gene NameDuplicated homeodomain-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:2755470-2757741 | Reverse length=298
E-Value5.7E-123
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 142.062830811309
Replicate 238.646899828935
Replicate 331.934402077644
Condition 2: 8 Hour
Replicate 140.9332995349
Replicate 238.212318649734
Replicate 336.766260634095
Condition 3: 24 Hour
Replicate 118.252939560933
Replicate 229.432533825659
Replicate 321.921172821896


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_40530.p1 GENE.S_Transcript_40530~~S_Transcript_40530.p1 ORF type:complete len:298 (+),score=69.66,Myb_DNA-binding|PF00249.27|1.3e-08,Myb_DNA-binding|PF00249.27|3.8e-11 S_Transcript_40530:1374-2267(+)
ATGAAAGTTGACGAAAAGGGTGGTAGCTCATTTTGGACTATAGACCAGGATAAGGCATTTGAGAATGCCCTTGCTACTCATCCTGAAGATTTGGCTGACCGTTGGGAAAAGATAGCTGCATATGTTCCAGGCAAGACCTTGGAAGAGGTGAAGCATCACTATGAACTCCTTGTTGAGGATGTAAATCAGATTGAAGCTGGTCATGTGCCCTTGCCTTCCTATAGCTCTTCTTCAGAGGGCTCTACGGGTTATGCTGCTGAAGATGGTAATGGGAAAAAGGGTCAAATCGGAAATGGTGGAAGTGAATCCAATCACGGAGGCAAGACTTCGAAGGCTGATCAGGAGCGCCGTAAAGGAATAGCCTGGACTGAGGATGAGCACAGGTTATTTCTTCTTGGATTGGACAAATATGGGAAAGGTGACTGGCGGAGTATATCCCGGAACTTTGTGGTAACAAGGACACCAACACAAGTGGCCAGCCATGCGCAGAAGTATTTTATTAGATTAAACTCAATGAATAAAGATAGAAGACGATCCAGCATCCACGATATCACCAGTGTGAACAGTGGGGATCTTTCATCTCCTCAGGGGCCAATTACTGGTCAAGCAAATGCTGCTGCTACTACTTCTGGAGCTTCTTCCGGCAAATCTATCAAACAGCCAACTCAACCCCCTGCTGCTCCCCCAGGAGTTGGCGTGTGTGGTACGCCAACAATTGGACAACCTATTGGCGGACCTTTGGTTTCTGCTGTTGGCACTCCGGTAAATCTTCCAGCCGCTCCTCACATGGCTTATGGTGTGCAAGCCCCAGTTCCAGGAGCAGTCGTTCCTGGCGCCCCAATGGGCATGCCTTCCATGACATATCCGATGCCCCACACTTCTGCTCATAGGTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_40530.p1 GENE.S_Transcript_40530~~S_Transcript_40530.p1 ORF type:complete len:298 (+),score=69.66,Myb_DNA-binding|PF00249.27|1.3e-08,Myb_DNA-binding|PF00249.27|3.8e-11 S_Transcript_40530:1374-2267(+)
MKVDEKGGSSFWTIDQDKAFENALATHPEDLADRWEKIAAYVPGKTLEEVKHHYELLVEDVNQIEAGHVPLPSYSSSSEGSTGYAAEDGNGKKGQIGNGGSESNHGGKTSKADQERRKGIAWTEDEHRLFLLGLDKYGKGDWRSISRNFVVTRTPTQVASHAQKYFIRLNSMNKDRRRSSIHDITSVNSGDLSSPQGPITGQANAAATTSGASSGKSIKQPTQPPAAPPGVGVCGTPTIGQPIGGPLVSAVGTPVNLPAAPHMAYGVQAPVPGAVVPGAPMGMPSMTYPMPHTSAHR*

Click here to download the sequence:
Link to NCBI Protein BLAST