Transcript Information: S_Transcript_405439.p2


Annotated TAIR IDATMG01250.1
Annotated Gene NameRNA-directed DNA polymerase (reverse transcriptase)
Annotated Gene Symbol(s)ORF102
Annotation TypeHomolog
Chromosome PositionchrM:310514-310882 | Forward length=122
E-Value7E-07
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10
Replicate 20
Replicate 30.40092904529566
Condition 2: 8 Hour
Replicate 10
Replicate 20
Replicate 30
Condition 3: 24 Hour
Replicate 10.23744438576733
Replicate 20
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_405439.p2 GENE.S_Transcript_405439~~S_Transcript_405439.p2 ORF type:5prime_partial len:92 (+),score=18.18,RVT_1|PF00078.23|2e-09 S_Transcript_405439:3-278(+)
CAGTGGGTCAGGGGTTGTTTCTCTAATGCTGCGTTTTCTGTGTTGGTGAATGGGGCGCCGAGGGAGGGGTTCTCTTCCTTCCGAGGATTGAGACAAGGGGATCCCTTGTCCCATTTTCTGTTTACTCTGGTGGCAGACATCCTTAATAGGCTGTTGGATAGGGTGGTGGACAGAGGCTTGGTGGAAGGCTTTGTTGTGGGAAGGGAGGGTGTGCGGGTCTCACAATTGTTGTTTGCAGATGATGCTATTTTGTTCCTAGGGAAAGACTTTATGTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_405439.p2 GENE.S_Transcript_405439~~S_Transcript_405439.p2 ORF type:5prime_partial len:92 (+),score=18.18,RVT_1|PF00078.23|2e-09 S_Transcript_405439:3-278(+)
QWVRGCFSNAAFSVLVNGAPREGFSSFRGLRQGDPLSHFLFTLVADILNRLLDRVVDRGLVEGFVVGREGVRVSQLLFADDAILFLGKDFM*

Click here to download the sequence:
Link to NCBI Protein BLAST