Transcript Information: S_Transcript_405520.p1


Annotated TAIR IDAT4G39910.1
Annotated Gene Nameubiquitin-specific protease 3
Annotated Gene Symbol(s)ATUBP3, UBP3
Annotation TypeOrtholog
Chromosome Positionchr4:18511858-18514139 | Reverse length=371
E-Value2.6E-114
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 120.351118591609
Replicate 222.452132902647
Replicate 318.225762717911
Condition 2: 8 Hour
Replicate 122.078051151855
Replicate 220.397861995045
Replicate 321.817396960393
Condition 3: 24 Hour
Replicate 118.118403365728
Replicate 217.59778310634
Replicate 321.661285194982


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_405520.p1 GENE.S_Transcript_405520~~S_Transcript_405520.p1 ORF type:5prime_partial len:170 (-),score=34.73,UCH|PF00443.25|1.3e-32,UCH_1|PF13423.2|7e-16 S_Transcript_405520:304-813(-)
CTCGATATTGAGCAGAATAGCTCAATCACAAGCTGTCTGAAAAATTTTAGTTCAACTGAAACCTTAAATGCTGAGGACAAATTTTTCTGTGACAAATGCTGCAGTTTGCAAGAAGCACAGAAAAGGATGAAGATTAAAAAGCCCCCTCACGTCCTAGTCATCCATTTGAAGCGTTTCAAGTACATTGAACAGTTGGGTCGCTATAAGAAACTTTCCTACAGGGTGGTCTTCCCTCTCGAGCTAAAGCTGAGCAACACTGTGGAAGATGCAGATAGAGAGTACTCCTTGTTTGCTGTTGTTGTTCATGTTGGTGGTGGGCCCAATCATGGCCATTACGTAAGCCTTGTGAAAAGTCATAACCACTGGTTGTTTTTTGATGACGAGAATGTGGAGATGATTGATGAATCTGCTGTCCAGACATTCTTTGGGTCAGTGCAAGAGTACTCTAGTAACACAGATCATGGGTACATTTTGTTTTATGAGTCCCTTGATCATAGTAACAAGAGTTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_405520.p1 GENE.S_Transcript_405520~~S_Transcript_405520.p1 ORF type:5prime_partial len:170 (-),score=34.73,UCH|PF00443.25|1.3e-32,UCH_1|PF13423.2|7e-16 S_Transcript_405520:304-813(-)
LDIEQNSSITSCLKNFSSTETLNAEDKFFCDKCCSLQEAQKRMKIKKPPHVLVIHLKRFKYIEQLGRYKKLSYRVVFPLELKLSNTVEDADREYSLFAVVVHVGGGPNHGHYVSLVKSHNHWLFFDDENVEMIDESAVQTFFGSVQEYSSNTDHGYILFYESLDHSNKS*

Click here to download the sequence:
Link to NCBI Protein BLAST