Transcript Information: S_Transcript_405593.p1


Annotated TAIR IDAT3G51325.1
Annotated Gene NameRING/U-box superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr3:19052259-19052531 | Forward length=90
E-Value4E-12
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.90984619607455
Replicate 20
Replicate 30.15763022293676
Condition 2: 8 Hour
Replicate 10.72907317323532
Replicate 20.7648495261445
Replicate 30.54656019499952
Condition 3: 24 Hour
Replicate 10
Replicate 20.38741558250167
Replicate 30.43114605820711


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_405593.p1 GENE.S_Transcript_405593~~S_Transcript_405593.p1 ORF type:complete len:117 (+),score=19.88,zf-RING_2|PF13639.2|1.3e-11,zf-RING_2|PF13639.2|9.3e+03,zf-RING_11|PF17123.1|5.2e-08,zf-RING_11|PF17123.1|1.2e+03,zf-C3HC4|PF00097.21|4.9e-07,zf-C3HC4|PF00097.21|1.2e+03,zf-RING_5|PF14634.2|1.8e-06,zf-RING_5|PF14634.2|7.3e+03,zf-C3HC4_3|PF13920.2|1.9e-06,zf-C3HC4_3|PF13920.2|6.7e+03,zf-rbx1|PF12678.3|6.3e-06,zf-rbx1|PF12678.3|6e+03 S_Transcript_405593:65-415(+)
ATGCAGAACATCATATGCGTGATTTTCAACTTGATTGGCCTAAGAAGAAGGCTCGACGAATCGAATCAGAAGCTTCAAGTTGTTCATTCCGACGATGATTTATGTTGTGTTTGCTTGTCAAGGCTAACGAAAGAAGGCCAAGATATAAGGGTTCTACCTTGCCTTCACCCTTTCCACTCAGCTTGTGTGGACCAGTGGTTCAATGCTCGGCGTAAAACATGTCCAATTTGCAGGTTTCTGGTGGAAGAAGATCATCATAAGATGTGTAAGGAGGATGAAGAGTTGACTGAGGAAATGATCATTTGGTATTCATCTTCTTTTCATGTAGCTGGCTTTTCTGGCTTTTTCTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_405593.p1 GENE.S_Transcript_405593~~S_Transcript_405593.p1 ORF type:complete len:117 (+),score=19.88,zf-RING_2|PF13639.2|1.3e-11,zf-RING_2|PF13639.2|9.3e+03,zf-RING_11|PF17123.1|5.2e-08,zf-RING_11|PF17123.1|1.2e+03,zf-C3HC4|PF00097.21|4.9e-07,zf-C3HC4|PF00097.21|1.2e+03,zf-RING_5|PF14634.2|1.8e-06,zf-RING_5|PF14634.2|7.3e+03,zf-C3HC4_3|PF13920.2|1.9e-06,zf-C3HC4_3|PF13920.2|6.7e+03,zf-rbx1|PF12678.3|6.3e-06,zf-rbx1|PF12678.3|6e+03 S_Transcript_405593:65-415(+)
MQNIICVIFNLIGLRRRLDESNQKLQVVHSDDDLCCVCLSRLTKEGQDIRVLPCLHPFHSACVDQWFNARRKTCPICRFLVEEDHHKMCKEDEELTEEMIIWYSSSFHVAGFSGFF*

Click here to download the sequence:
Link to NCBI Protein BLAST