Transcript Information: S_Transcript_40562.p1


Annotated TAIR IDAT1G27150.1
Annotated Gene NameTetratricopeptide repeat (TPR)-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:9429177-9432068 | Forward length=468
E-Value4.7E-214
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 111.149446833265
Replicate 210.311451119512
Replicate 310.560893083662
Condition 2: 8 Hour
Replicate 117.733745632142
Replicate 219.357536401953
Replicate 318.309191205963
Condition 3: 24 Hour
Replicate 18.9678995382439
Replicate 26.9661399792563
Replicate 311.947284191897


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_40562.p1 GENE.S_Transcript_40562~~S_Transcript_40562.p1 ORF type:complete len:475 (+),score=100.22 S_Transcript_40562:197-1621(+)
ATGGGGGAAGAATGTGTGAAATTGGACAAATGGGGATACCCAGTAAAGACTTCATCTGACAATTGCATCGCTGTCATCAATGATTTCTATCACCAGGTGCTTAGTTATGGCAGAAAGAGGTCAATCATAATGGAAGCACCAGTACATGATGGGAACTGTTTATTGGGCAATATATTAGCTGCCCATTATGCATTTCCTTGTAACCCTTCTAAAGCTAGTACCTTTCTTCAGGCTGCAAAGACCCACTATGATGAAGCAACAGCTTATGAGAAAGCAGTTTTTGATGCTGTGTCTTACTTGATGTCAAATGATAGGGATGATGATGTTGCCCTTGACCTACATTTCAAGTTATTAAGAGATTTCCCAAGGGACCTGGCCTCTCTGAAGAGGGCTCAATTACTTTGCTTCTACATGGGGCGGCCGAGTCCCTTTCTCAATCTTGTGGAGCAGGTTCTACCTGAAAATGAAAAGGAGAATTACATATATGGCATGCTTGCATTTCCTCTATTGGAGCTTGGTCGTATGGAGGAGGCTGAAATAGCTTCGAGAAAGGCACTTGAGATCAATAAGCAAGATCCATGGGGGCAACATTGTTTGTGCCATGTTCTTCAATACCAATGTCATCTTGACGAAGCTGTAAAGTTCATGGAGGAATGTTCGCCTTCATGGAGCCTTTGTTCATCTTTCCTGTACACACACAACTGGTGGCATATAGCAGTTTGTTACTTGGAAGCTCATTCTCCAGTCAAAAGAGTGTTGGATATATACGATCATTGTATAATGAAGGAACTAGATAAACCTGATGCAGCACGGGCAGAGGTCTATGTAAATGCTTTGGGATTGTTGTTGAGGTTGCATGTACGAGGTGAAATCAGTCTCTTTGAGGACCGTCTGAAGACTTTGGCCTCCCTTCTGACAGATAAAGCGACTTGGTACATAGAGTGGCACCTTGATCTGCTTATACTGTGGGCCTTAGCAAGTTCTGACAACCTTCCTGCAGCACAAGACTTGCTTGAAGGTTTAAGATTCAGAGTGTCAAATATGAGCAAAAAGAAGCAGGAGCTAATGCAAAGAGGACTCTCGCTTGTAGAAGCTTTGTATGAGTATGGCAGAGGAAATGATGAACGGGCGCTGCAACTATTTGGTTTTGATTATGACGCTATTGATTGCAAGGCCATTGGGGCATCTGATGAGCAACTTGATGTATTCAATGAAGTCTGGTATATCTTGCTACTCAATACTGGGAAAGCTGTGAAAGTGATTGAGGTCATTGAGAAACGACTTGAGAAGAGGGATGGCGTGCCCTTTTTGTGGCGTTTATTGGAAAAAGCGTACTTGATGATGGGCAGGGATGAAGCTGCTGCAAGCGCAGCCAATAAAGCAAGTATCCTAGAGACTACTTATTCACAGAAATTGGGATCATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_40562.p1 GENE.S_Transcript_40562~~S_Transcript_40562.p1 ORF type:complete len:475 (+),score=100.22 S_Transcript_40562:197-1621(+)
MGEECVKLDKWGYPVKTSSDNCIAVINDFYHQVLSYGRKRSIIMEAPVHDGNCLLGNILAAHYAFPCNPSKASTFLQAAKTHYDEATAYEKAVFDAVSYLMSNDRDDDVALDLHFKLLRDFPRDLASLKRAQLLCFYMGRPSPFLNLVEQVLPENEKENYIYGMLAFPLLELGRMEEAEIASRKALEINKQDPWGQHCLCHVLQYQCHLDEAVKFMEECSPSWSLCSSFLYTHNWWHIAVCYLEAHSPVKRVLDIYDHCIMKELDKPDAARAEVYVNALGLLLRLHVRGEISLFEDRLKTLASLLTDKATWYIEWHLDLLILWALASSDNLPAAQDLLEGLRFRVSNMSKKKQELMQRGLSLVEALYEYGRGNDERALQLFGFDYDAIDCKAIGASDEQLDVFNEVWYILLLNTGKAVKVIEVIEKRLEKRDGVPFLWRLLEKAYLMMGRDEAAASAANKASILETTYSQKLGS*

Click here to download the sequence:
Link to NCBI Protein BLAST