Transcript Information: S_Transcript_405865.p1


Annotated TAIR IDAT5G20480.1
Annotated Gene NameEF-TU receptor
Annotated Gene Symbol(s)EFR
Annotation TypeHomolog
Chromosome Positionchr5:6922497-6925679 | Forward length=1031
E-Value9E-75
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.20367092782026
Replicate 20.1688478792667
Replicate 30.28228677678981
Condition 2: 8 Hour
Replicate 10.10880301182211
Replicate 20.057071042448282
Replicate 30.10875432451521
Condition 3: 24 Hour
Replicate 10.055726743598455
Replicate 20
Replicate 30.064341950013051


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_405865.p1 GENE.S_Transcript_405865~~S_Transcript_405865.p1 ORF type:internal len:392 (-),score=50.91,LRR_8|PF13855.2|0.063,LRR_8|PF13855.2|0.01,LRR_8|PF13855.2|0.073,LRR_8|PF13855.2|4.7e-08,LRR_8|PF13855.2|9.1e-06,LRR_8|PF13855.2|1.2e-06,LRR_8|PF13855.2|7.6e-05,LRR_4|PF12799.3|0.023,LRR_4|PF12799.3|2,LRR_4|PF12799.3|0.92,LRR_4|PF12799.3|0.42,LRR_4|PF12799.3|2.8e+02,LRR_4|PF12799.3|4.5e-05,LRR_4|PF12799.3|0.85,LRR_4|PF12799.3|9.8e+03,LRR_1|PF00560.29|50,LRR_1|PF00560.29|2.3e+02,LRR_1|PF00560.29|1.5e+04,LRR_1|PF00560.29|45,LRR_1|PF00560.29|7.6,LRR_1|PF00560.29|8.4e+02,LRR_1|PF00560.29|44,LRR_1|PF00560.29|41,LRR_1|PF00560.29|11,LRR_1|PF00560.29|11,LRR_1|PF00560.29|17 S_Transcript_405865:2-1174(-)
TCTAGTCTCACTAAGGTTGATTTGGGTTCTAATAATTTCATTGGGCATATTCCATTGCTATCTAGTCTCCCAGAACTTCAAGATTTAAATTTGGAAATTAACAACCTTGTCACTAATGGTGAACACGGATGGGATTTCCTTACTTCTCTGGCTAATTCTACACAGCTTCAAAACTTGTATTTGGGGAGCAACTTGGCCACTGGTAAGCTTCCCTCCTCTATAGGGAACCTTTCTCAACACTTGTCTGAGTTTGTCGTATGGGAAAATCACTTAGAAGGAAGCTTACCTGCTGAAATTGGTAATTTGGCCGGCCTCTCCGCACTGTATCTTTCATCCAATTTATTCAGTGGACATATTCCACCATCTATGGGAAACATGTCAAAGCTACAAGTAATTTATATGGATGAAAATAATTTTTCAGGGGAGATACCGGAGTCATTTGGTAACTTGAATGTCTTGTCAGTTATGAGCATAGGTAAAAACTATCTAAGTGGAGCCATACCATCAAGTCTTGGAAACCTTCAACATCTTCAACAACTCGACCTCTCAGACAATATGCTAAACAGAACCATCCCTATTGAGATCTTTGACATTCCAAGCTTAGATTTATACCTTAATCTTTCATTTAACTCCTTGAGCGGTAATATCCCTGAACAAATAGGCAACTTAAAGATGATTGATAAAATAGATTTATCCAGTAATCAACTCTCGGGAGACATACCATCTTCTATAGGAAGTTGTTCGGCTCTTGAGTACCTAAATTTGTCCAACAATGCTCTTGACGGTCAAATACCAAAGACTCTGGGTGATATAAAGGGGTTTGAGTTCATTGATTTTTCATCAAACAACTTGTCTGGAGAGATTCCCGTCTCTCTAATCTCTCTTCGTTTTCTACAATACTTGAATCTTTCCATGAATCACCTTGAAGGTATGGTGCCATCAACGGGCATATTTGCAAACGCAACTATTGTTTCGCTTTCTGGAAACCCTCACCTTTGTGGAGGAATAGCAGAGTTGAATCTTCCCAAATCTAACCTCCCGCATGCAAAGAGGTCAAAAGCAAAGTTGATCATAGGACTTGTAGTCGGTGTAGTGGCGCCTTTCATTCTCATAGTAGGAGCTCTAGTTGTTCTGTTATTGAGAAAAACATGGCTACGGAAAGCTCCACATGTG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_405865.p1 GENE.S_Transcript_405865~~S_Transcript_405865.p1 ORF type:internal len:392 (-),score=50.91,LRR_8|PF13855.2|0.063,LRR_8|PF13855.2|0.01,LRR_8|PF13855.2|0.073,LRR_8|PF13855.2|4.7e-08,LRR_8|PF13855.2|9.1e-06,LRR_8|PF13855.2|1.2e-06,LRR_8|PF13855.2|7.6e-05,LRR_4|PF12799.3|0.023,LRR_4|PF12799.3|2,LRR_4|PF12799.3|0.92,LRR_4|PF12799.3|0.42,LRR_4|PF12799.3|2.8e+02,LRR_4|PF12799.3|4.5e-05,LRR_4|PF12799.3|0.85,LRR_4|PF12799.3|9.8e+03,LRR_1|PF00560.29|50,LRR_1|PF00560.29|2.3e+02,LRR_1|PF00560.29|1.5e+04,LRR_1|PF00560.29|45,LRR_1|PF00560.29|7.6,LRR_1|PF00560.29|8.4e+02,LRR_1|PF00560.29|44,LRR_1|PF00560.29|41,LRR_1|PF00560.29|11,LRR_1|PF00560.29|11,LRR_1|PF00560.29|17 S_Transcript_405865:2-1174(-)
SSLTKVDLGSNNFIGHIPLLSSLPELQDLNLEINNLVTNGEHGWDFLTSLANSTQLQNLYLGSNLATGKLPSSIGNLSQHLSEFVVWENHLEGSLPAEIGNLAGLSALYLSSNLFSGHIPPSMGNMSKLQVIYMDENNFSGEIPESFGNLNVLSVMSIGKNYLSGAIPSSLGNLQHLQQLDLSDNMLNRTIPIEIFDIPSLDLYLNLSFNSLSGNIPEQIGNLKMIDKIDLSSNQLSGDIPSSIGSCSALEYLNLSNNALDGQIPKTLGDIKGFEFIDFSSNNLSGEIPVSLISLRFLQYLNLSMNHLEGMVPSTGIFANATIVSLSGNPHLCGGIAELNLPKSNLPHAKRSKAKLIIGLVVGVVAPFILIVGALVVLLLRKTWLRKAPHV

Click here to download the sequence:
Link to NCBI Protein BLAST