Transcript Information: S_Transcript_405900.p1


Annotated TAIR IDATMG00860.1
Annotated Gene NameDNA/RNA polymerases superfamily protein
Annotated Gene Symbol(s)ORF158
Annotation TypeHomolog
Chromosome PositionchrM:235916-236392 | Forward length=158
E-Value1E-26
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.14951124289427
Replicate 20
Replicate 30.13814783583221
Condition 2: 8 Hour
Replicate 10.1198055635794
Replicate 20.041894847639938
Replicate 30.23950390567395
Condition 3: 24 Hour
Replicate 10.20454010758983
Replicate 20.084883189424522
Replicate 30.1889291715739


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_405900.p1 GENE.S_Transcript_405900~~S_Transcript_405900.p1 ORF type:3prime_partial len:534 (+),score=89.28,RVT_1|PF00078.23|8.1e-21 S_Transcript_405900:472-2070(+)
ATGCAAAAACATGAAATTGAAAAAATTGTAGCTGATATGCTGAACAGGGGTATTATCCAACCAAGTTCTAGTCCTTTTGCCTCCCCCATGGTGCTAGTTAAAAAGAAGGATGGAACATGGAGATTTTGTGTTGACTACAGGGGCCTCAACAAGATCACAGTCAAGGACCAATTTCCTATTCCCTTGGTAGAAGAATTAATGGATGAGTTGGGTGGAGCTAGGGTGTTCTCCAAGATTAACTTGAGGCAAGGTTATCACCAAGTTAGAATGTATAAGGAAGACATCTTCAAAACAGCCTTTAAGAGACACTCAGGACACTATGAGTATTTGGTCATGCCGTTTGGGCTTACCAATGCTCCAGCTACATTTCAAAACCTCATGAATGCAGTCTTCTCTCCATTTCTCAGAAAATTTGTGTTGGTTTTCTTTGATGATATATTGGTTTATAGCCCTGACTTTTCATCTCACCTATGCCAAAGAGTCCAAGTGTGCTTTTCAGTTTCTAGAGTGGAATACTTGGGTCACTTTATTTCTGCAGGTATAGAGACTAATCCAAGTAAAATACAGGCCATTTTGGCCTGGCCAGCACCCACTATATTGAAACAATTGAGAGGGTTTTTGGGTCTCACAGGGTACTACAGGAGATTTGTCAAGAATTATGGGATTATAGCTAAACCCCTGACTCAGTTACTAAAGAAGAACAAGTTTGATTGGAATGTGGCAGCAGAATCTACTTTTCAAGCTCTTAAGCAGGCTATGACAACCAACCCAGTGTTGGCTCTATCCAACTTTAGCAAGCCCTTTATTGTGGAGACTGATGCATGTGCTGCAAGCATAGGTGCTGTGTTGATGCAGGATCATCATCCCATTGCCTTTATCAGCAGAGCTTTAGGGTTAAAACATCATGGATTGTCCATCTATGAAAAGGAGTTACTAGCTGTGGTTTTTGTAGTTCAGAAATGGGGAACATACCTTTTCAACAGACATTTTGTGATAAGAACAGAACAAAAAAGCCTCAAGTATCTCCTTGAACAAAAGGTCACCACCCCCTTTCAACAGGAATGGGTCTCCAAACTCTTGGGATTTGATTATGAGATCCAATTTAGGCAAAGGAAAGAGAACAAAGCTGCTGATGCTCTCTCCAGGGTACAACGGGAAGAACTTTTGCTAATGACGATTCAGGCTATCAGTAGCCCTTTGCTTGATCAAATCAAGAACTCCTGGAAGGCTGACTCACAACTTCAACAGCTTATTCAGGATAAGCTAGCAGATCCAAGATCTCACCCTAAGTTCTCATGGAACCAAGGCTTGCTTAAAAGACATGGTAAGCTGTTGGTAGGAAATGATAAAGCTACTAGGAGGATCATCCTCTCTTGGATGCACAACACCCACTCTGGCAGACAAGCTACATTGCAAAGAGTCAAACAACTATTCTGTTGGAAGGGCATGGCCAAGACAGTTCAGGCCTTTATAAGACAATGTGATATTTGCCAAAGAAACAAAGCTGATTTGGCAGCTTCCCCAGGCATACTTCAACCCTTACCTATTCCTAACAAGGTCTGGCCTAATATAACCATGGATTTTATTGATGGGTTACCC

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_405900.p1 GENE.S_Transcript_405900~~S_Transcript_405900.p1 ORF type:3prime_partial len:534 (+),score=89.28,RVT_1|PF00078.23|8.1e-21 S_Transcript_405900:472-2070(+)
MQKHEIEKIVADMLNRGIIQPSSSPFASPMVLVKKKDGTWRFCVDYRGLNKITVKDQFPIPLVEELMDELGGARVFSKINLRQGYHQVRMYKEDIFKTAFKRHSGHYEYLVMPFGLTNAPATFQNLMNAVFSPFLRKFVLVFFDDILVYSPDFSSHLCQRVQVCFSVSRVEYLGHFISAGIETNPSKIQAILAWPAPTILKQLRGFLGLTGYYRRFVKNYGIIAKPLTQLLKKNKFDWNVAAESTFQALKQAMTTNPVLALSNFSKPFIVETDACAASIGAVLMQDHHPIAFISRALGLKHHGLSIYEKELLAVVFVVQKWGTYLFNRHFVIRTEQKSLKYLLEQKVTTPFQQEWVSKLLGFDYEIQFRQRKENKAADALSRVQREELLLMTIQAISSPLLDQIKNSWKADSQLQQLIQDKLADPRSHPKFSWNQGLLKRHGKLLVGNDKATRRIILSWMHNTHSGRQATLQRVKQLFCWKGMAKTVQAFIRQCDICQRNKADLAASPGILQPLPIPNKVWPNITMDFIDGLP

Click here to download the sequence:
Link to NCBI Protein BLAST