Transcript Information: S_Transcript_406521.p1


Annotated TAIR IDAT5G25930.1
Annotated Gene NameProtein kinase family protein with leucine-rich repeat domain
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:9050880-9053978 | Forward length=1005
E-Value7E-151
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.088415286495616
Replicate 20.07329830417779
Replicate 30.21445041957675
Condition 2: 8 Hour
Replicate 10
Replicate 20
Replicate 30.10622515417765
Condition 3: 24 Hour
Replicate 10.21772309126838
Replicate 20
Replicate 30.16758833491771


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_406521.p1 GENE.S_Transcript_406521~~S_Transcript_406521.p1 ORF type:internal len:602 (+),score=88.76,LRR_8|PF13855.2|0.0032,LRR_8|PF13855.2|0.0033,LRR_8|PF13855.2|9.5e-06,LRR_8|PF13855.2|6.7,LRR_8|PF13855.2|1.7,LRR_8|PF13855.2|0.01,LRR_8|PF13855.2|0.033,LRR_8|PF13855.2|0.47,LRR_4|PF12799.3|19,LRR_4|PF12799.3|0.032,LRR_4|PF12799.3|0.074,LRR_4|PF12799.3|0.11,LRR_4|PF12799.3|0.0029,LRR_4|PF12799.3|28,LRR_4|PF12799.3|1.6e+03,LRR_4|PF12799.3|2.5e+02,LRR_4|PF12799.3|4.5e+02,LRR_4|PF12799.3|2.5e+02,LRR_4|PF12799.3|0.097,LRR_4|PF12799.3|0.00087,LRR_4|PF12799.3|0.0011,LRR_4|PF12799.3|0.036,Pkinase|PF00069.21|7e-16,Pkinase_Tyr|PF07714.13|5.3e-11,LRR_1|PF00560.29|3.7,LRR_1|PF00560.29|7.8e+02,LRR_1|PF00560.29|0.23,LRR_1|PF00560.29|5.9,LRR_1|PF00560.29|89,LRR_1|PF00560.29|2.1e+03,LRR_1|PF00560.29|2.7e+02,LRR_1|PF00560.29|4.3e+03,LRR_1|PF00560.29|1.5e+03,LRR_1|PF00560.29|31,LRR_1|PF00560.29|9.1e+02,LRR_1|PF00560.29|2.7,LRR_1|PF00560.29|0.81,LRR_1|PF00560.29|8.2e+03,LRR_1|PF00560.29|1.6e+04 S_Transcript_406521:2-1804(+)
CCCTACAACCCATTTGCCCCCATGAAGCTGCCCAGAGAATTTGGGAAGCTTAAGAGCTTGAAGTTCCTTTGGATGACCAAGTGTAATTTGATTGGGGAAATCCCAGAAAGTTTTCGTAATCTATCTAGCCTTGAGCAGTTAGATTTGGTGAAGAATGATTTGGTGGGTGAGATACCAAGTGGGTTGTTCTTGCTCAAGAATTTGACTTTCTTATACTTGTATAATAATAAGCTGTCCGGAGGGCTTCCTAACTCGATTGAGGCCTTGAGTTTGAAGGAAATCGATCTCTCGGCGAACAATTTGACAGGAACAATCCCAGATTGGATCGGAGACTTGCCAAGGTTGGAGATTTTGGATTTATTTAGCAATGATTTCTATGGAGTGTTACCACCAAATATAGGCCGTATTCCTACCTTGAAGGCATTAAAGCTGTGGAGCAACAGGTTCTCTGGTCCTCTACCCCCAGAATTAGGCCTACACTCAAACCTCGAGGAATTGCAGGTATCTGAAAATGGATTCACAGGCCAGCTGCCGGCAAATCTCTGTTCTGGTAAGACCTTGGTTGGTGTGGTGGCATTCGACAACAAGCTCAATGGGTCGATACCAAGTTCTTTAGGTCAATGCCACTCTTTGTTCACAGTTCAGCTCCACAAAAACAGCCTCTCAGGGGAAATACCTCAAGGGCTATGGACCTTGCAAAAGATATCAATATTGACATTCAGTGACAACCAATTGTCCGGCCAGCTACCGGAGAACTTGTCTTGGAATATGACCCAGGTTGAGATGAATAACAACAGATTTTCGGGAGAAATCCCATCGAGCGTAGGAACTTGGAAGAGTTTGGTGAAATTTCAGGCCAGCAACAACATGCTGTCAGGCACTATTCCATTGGAGCTGACTAGCCTTCCCCTCCTTGAGACTCTCATTTTGAGTGGAAATCAACTCACAGGTGAGCTTCCCTCTGAAATCATCTCATGGCAAAGCTTGAACAGCTTGATCCTGGCAGGGAACAAGCTTTCTGGACAGATCCCACCGCTTCTTGGCTTGTTGCCTGTCCTTAACTATCTCGATTTATCCAATAACCAGTTCTCCGGTCAAATTCCTCCTGAACTAGGTCATCTAAAGCTCAATTCTCTTAACCTTTCCTCTAATAAGCTCACAGGGAGCATTCCATACGCGTTTGATAATAATGCATATGGGGATAGCTTCTTCAATACCAACTTATGCTCTGATGGTGGAGTCTCAAATCTCCCAAAATGCTCGATTTATCATCAAAACTCCAAGAAAACGTCCTCAAAACACCTTGCTTTGATAGTAGTCCTTACATTAGTGGCTTTCCTAGCAACTTTATACTTCACTTGGTTCATAATCAAGATACTCCAGCAAAGAAAGCATCCCAAAGACCTAACAACATGGAAACTGACCTCATTTCACAAGGTAGACTTCACTGAAGAGAAAATCCTTGCCAACTTGACTGACAACAATATTATCGGGTCAGGAGGGTCTGGGCAAGTTTACCGCATACCCACAAACCAATCAGGGGACCTTGTGGCAGTAAAGAGGATATGGAACAACAAGAGATTGAGCAATACATTGGACAAAGAATTCCCAGCTGAGGTTCAAATTCTGGGTACAATAAGGCATCTAAACATAGTCAAGTTACTTTGCTATATATCAAACGAGGACTCAAAACTCCTTGTTTATGAGTACATGGAGAATCAGAGCCTGGACAAGTGGATCCATTCAGGGAAAAAGAGACCTGTTTCATCATCTATGTGTGGGTCTGTTATTGATTGGCCTGCA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_406521.p1 GENE.S_Transcript_406521~~S_Transcript_406521.p1 ORF type:internal len:602 (+),score=88.76,LRR_8|PF13855.2|0.0032,LRR_8|PF13855.2|0.0033,LRR_8|PF13855.2|9.5e-06,LRR_8|PF13855.2|6.7,LRR_8|PF13855.2|1.7,LRR_8|PF13855.2|0.01,LRR_8|PF13855.2|0.033,LRR_8|PF13855.2|0.47,LRR_4|PF12799.3|19,LRR_4|PF12799.3|0.032,LRR_4|PF12799.3|0.074,LRR_4|PF12799.3|0.11,LRR_4|PF12799.3|0.0029,LRR_4|PF12799.3|28,LRR_4|PF12799.3|1.6e+03,LRR_4|PF12799.3|2.5e+02,LRR_4|PF12799.3|4.5e+02,LRR_4|PF12799.3|2.5e+02,LRR_4|PF12799.3|0.097,LRR_4|PF12799.3|0.00087,LRR_4|PF12799.3|0.0011,LRR_4|PF12799.3|0.036,Pkinase|PF00069.21|7e-16,Pkinase_Tyr|PF07714.13|5.3e-11,LRR_1|PF00560.29|3.7,LRR_1|PF00560.29|7.8e+02,LRR_1|PF00560.29|0.23,LRR_1|PF00560.29|5.9,LRR_1|PF00560.29|89,LRR_1|PF00560.29|2.1e+03,LRR_1|PF00560.29|2.7e+02,LRR_1|PF00560.29|4.3e+03,LRR_1|PF00560.29|1.5e+03,LRR_1|PF00560.29|31,LRR_1|PF00560.29|9.1e+02,LRR_1|PF00560.29|2.7,LRR_1|PF00560.29|0.81,LRR_1|PF00560.29|8.2e+03,LRR_1|PF00560.29|1.6e+04 S_Transcript_406521:2-1804(+)
PYNPFAPMKLPREFGKLKSLKFLWMTKCNLIGEIPESFRNLSSLEQLDLVKNDLVGEIPSGLFLLKNLTFLYLYNNKLSGGLPNSIEALSLKEIDLSANNLTGTIPDWIGDLPRLEILDLFSNDFYGVLPPNIGRIPTLKALKLWSNRFSGPLPPELGLHSNLEELQVSENGFTGQLPANLCSGKTLVGVVAFDNKLNGSIPSSLGQCHSLFTVQLHKNSLSGEIPQGLWTLQKISILTFSDNQLSGQLPENLSWNMTQVEMNNNRFSGEIPSSVGTWKSLVKFQASNNMLSGTIPLELTSLPLLETLILSGNQLTGELPSEIISWQSLNSLILAGNKLSGQIPPLLGLLPVLNYLDLSNNQFSGQIPPELGHLKLNSLNLSSNKLTGSIPYAFDNNAYGDSFFNTNLCSDGGVSNLPKCSIYHQNSKKTSSKHLALIVVLTLVAFLATLYFTWFIIKILQQRKHPKDLTTWKLTSFHKVDFTEEKILANLTDNNIIGSGGSGQVYRIPTNQSGDLVAVKRIWNNKRLSNTLDKEFPAEVQILGTIRHLNIVKLLCYISNEDSKLLVYEYMENQSLDKWIHSGKKRPVSSSMCGSVIDWPA

Click here to download the sequence:
Link to NCBI Protein BLAST