Transcript Information: S_Transcript_40704.p1


Annotated TAIR IDAT2G20880.1
Annotated Gene NameIntegrase-type DNA-binding superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr2:8986053-8987063 | Forward length=336
E-Value6.6E-32
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 126.268496364822
Replicate 233.058484029545
Replicate 341.77966103081
Condition 2: 8 Hour
Replicate 123.395816561515
Replicate 237.865620836819
Replicate 336.561162558706
Condition 3: 24 Hour
Replicate 137.044397893435
Replicate 233.592316187596
Replicate 333.629392540155


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_40704.p1 GENE.S_Transcript_40704~~S_Transcript_40704.p1 ORF type:complete len:309 (+),score=64.99,AP2|PF00847.16|5.1e-14 S_Transcript_40704:280-1206(+)
ATGGCAACAACTATAGATACTTACAATAGTACTAGTAGCAATACTCCTGCTTTGTTAGATCCTTTGAGCGAGGAGGTAATTAAAGCCCTTGAACCTTACTTCACCACCACCAACATGAAAACTTCTTCAGATTCAACTCTATGTTACAACCCTTACATGGTGATGAGCACGAACCATCTGTCACCAATGGAGACCCAATTTTTCACTGAAGGTGCATCATCTCAAACCCAAATGTTTCCTTTCCAATTCCACCACCACCAGCAACTTCCGAATGCGGATTCCCAAAAGGTGAGCCAGTTGTTATCTCTGAAGCCGGTGCCTATGAAACAAGCTTCGGCTCAGAGAAAGGCGGCGAATGTAGGGGCTAAGCTGTACAGGGGGGTTCGACAAAGGCACTGGGGCAAGTGGGTGGCTGAGATCAGACTCCCTAAGAACCGAACCAGACTTTGGCTCGGCACCTTTGACACGGCTGAAGAGGCTGCCTTGGCTTATGACAAGGCTGCCTACAAGCTCAGGGGTGAATTTGCTCGGCTCAATTTTCCAAACCTCAAGCACCATGGCGCTCATGTGGGTGGTGAGTTTGGACACTACAAGCCTCTTCATTCCTCTGTCAATGCTAAGCTTGATGCCATCTGTCAGAGCCTGGAGATTAATCAGAAACAGGGCAATACAGGAGAGACTACCTCTGTAGTTTCTGACTGTACTGCAGATGTTTCATCCAACTTGGTGGTTCCGAAATCCGAGTTCTGTCAAGGCGGGGAAGCTTTTACATCCCCTGCTTTCTCTGAAGAGTCATCATCGTTGTCGTCTCCGGAAGCTGACATCACTTTGTTGGATTTCAGTGAGCCTTCTTCCTGGGATGAATCTGACATCAATTTGACCTTGGATAAGTTCCCTTCTGTTGAGATCGACTGGTCTGCTCTTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_40704.p1 GENE.S_Transcript_40704~~S_Transcript_40704.p1 ORF type:complete len:309 (+),score=64.99,AP2|PF00847.16|5.1e-14 S_Transcript_40704:280-1206(+)
MATTIDTYNSTSSNTPALLDPLSEEVIKALEPYFTTTNMKTSSDSTLCYNPYMVMSTNHLSPMETQFFTEGASSQTQMFPFQFHHHQQLPNADSQKVSQLLSLKPVPMKQASAQRKAANVGAKLYRGVRQRHWGKWVAEIRLPKNRTRLWLGTFDTAEEAALAYDKAAYKLRGEFARLNFPNLKHHGAHVGGEFGHYKPLHSSVNAKLDAICQSLEINQKQGNTGETTSVVSDCTADVSSNLVVPKSEFCQGGEAFTSPAFSEESSSLSSPEADITLLDFSEPSSWDESDINLTLDKFPSVEIDWSAL*

Click here to download the sequence:
Link to NCBI Protein BLAST