Transcript Information: S_Transcript_40714.p2


Annotated TAIR IDAT5G52545.1
Annotated Gene Nameunknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: cultured cell; Has 16 Blast hits to 16 proteins in 8 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 16; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:21323959-21324198 | Reverse length=79
E-Value5E-20
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 13.760532783232
Replicate 22.8777551596758
Replicate 30.6013935679435
Condition 2: 8 Hour
Replicate 13.2451680917376
Replicate 22.188550410408
Replicate 33.0120219441822
Condition 3: 24 Hour
Replicate 10.94977754306931
Replicate 20.73903733401133
Replicate 31.6449159394641


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_40714.p2 GENE.S_Transcript_40714~~S_Transcript_40714.p2 ORF type:complete len:92 (+),score=33.79 S_Transcript_40714:81-356(+)
ATGCAGGAAGCTTTATTGGCCAAGGAGAAGATGCATGGGAGGTTGGCCTGTGGCCGACCTTTGGTTGTACGTCTTGCAAGTGAGAAGCCTGTGGCTGAAGTGGCAGTTAATTCATCGAAGGTCTGTGGTGTAGTGAGCCAATCAGCTGGTTCTGGCAGCAGTTCTGGACAAATGAGTCGGAGTGCCAAGATAGCTGCGATAAAGAACAAATTGAAGGCATTGGAAGACGATGGCGGTAGAGCAAAGAAGCAGAAACAGCTTGAGAGCATTTCATAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_40714.p2 GENE.S_Transcript_40714~~S_Transcript_40714.p2 ORF type:complete len:92 (+),score=33.79 S_Transcript_40714:81-356(+)
MQEALLAKEKMHGRLACGRPLVVRLASEKPVAEVAVNSSKVCGVVSQSAGSGSSSGQMSRSAKIAAIKNKLKALEDDGGRAKKQKQLESIS*

Click here to download the sequence:
Link to NCBI Protein BLAST