Transcript Information: S_Transcript_407186.p1


Annotated TAIR IDAT4G12210.1
Annotated Gene NameRING/U-box superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr4:7281308-7281919 | Reverse length=203
E-Value9E-10
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10
Replicate 20.24514210619461
Replicate 30
Condition 2: 8 Hour
Replicate 10
Replicate 20
Replicate 30.23684275116646
Condition 3: 24 Hour
Replicate 10
Replicate 20.12591006431304
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_407186.p1 GENE.S_Transcript_407186~~S_Transcript_407186.p1 ORF type:5prime_partial len:180 (+),score=29.68,zf-RING_2|PF13639.2|8.3e-13,zf-rbx1|PF12678.3|6.9e-10,zf-RING_11|PF17123.1|5.2e-07,zf-C3HC4_2|PF13923.2|5.2e-07,zf-C3HC4|PF00097.21|8.3e-07,zf-RING_5|PF14634.2|1.3e-05 S_Transcript_407186:1-540(+)
GCCACTTCTTCCTTTCTTTTCTCACATGAACAAAGAGAACAACAACAAACACTACTTGAAATCACTACTACTCATCACTCTGAGCCTGAGTCTGAGTCTGAGTCATCCTCCTCGTCATCCCCCACTCTGGTTCTGAAACCCAATGACTCATCCAGCTGGTCCCACCTCCGGGCTGCACTCACTCGCCTCGAACTCGACCTCGACTTCCACGACCAAGTCATGTCGGCCCTCGAAACCCGAGTCTCCGACATCCTTGCCGACATTGCTAATCAACTGTTGCTTGTGACTGTCTCTGTCAAGATCCGAAGGCAAACCCAGAACCCGGCCCAAAGGCTTGAGAAGGTTGAGGCAGAGGAAGATTTCATGTTGTTTGATGACAAGTGTGCAATTTGCTTAGAGGGTTTAGTAATTGATGGTGATAAAGAAGATATGTGGGCGGCCATGAAATTGCCATGCAAGCATGTTTTTCATCAAGCTTGCATTTCTATGTGGTTCAACAAGAGTTGTGTTTGCCCTCTGTGTCGATCTTCTTGTTTGTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_407186.p1 GENE.S_Transcript_407186~~S_Transcript_407186.p1 ORF type:5prime_partial len:180 (+),score=29.68,zf-RING_2|PF13639.2|8.3e-13,zf-rbx1|PF12678.3|6.9e-10,zf-RING_11|PF17123.1|5.2e-07,zf-C3HC4_2|PF13923.2|5.2e-07,zf-C3HC4|PF00097.21|8.3e-07,zf-RING_5|PF14634.2|1.3e-05 S_Transcript_407186:1-540(+)
ATSSFLFSHEQREQQQTLLEITTTHHSEPESESESSSSSSPTLVLKPNDSSSWSHLRAALTRLELDLDFHDQVMSALETRVSDILADIANQLLLVTVSVKIRRQTQNPAQRLEKVEAEEDFMLFDDKCAICLEGLVIDGDKEDMWAAMKLPCKHVFHQACISMWFNKSCVCPLCRSSCL*

Click here to download the sequence:
Link to NCBI Protein BLAST