Transcript Information: S_Transcript_407211.p2


Annotated TAIR IDAT5G42270.1
Annotated Gene NameFtsH extracellular protease family
Annotated Gene Symbol(s)VAR1, FTSH5
Annotation TypeOrtholog
Chromosome Positionchr5:16902659-16905102 | Forward length=704
E-Value1.3E-69
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10
Replicate 21.2763597264678
Replicate 30
Condition 2: 8 Hour
Replicate 10
Replicate 20
Replicate 30
Condition 3: 24 Hour
Replicate 10
Replicate 20.37460845580739
Replicate 30.20844664797617


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_407211.p2 GENE.S_Transcript_407211~~S_Transcript_407211.p2 ORF type:3prime_partial len:121 (+),score=-6.77,AAA|PF00004.25|2.5e-15 S_Transcript_407211:2-361(+)
ATGGGCGGCATGGGCGGCATGGGTGGCAGCCCGATGGACTTTGGCAAGAACAAGAGCAAGTTCAGCGAGGTGCCAGACACGGGCATCCTCTTTGACGACGTCGCCGGCGTCGAGGGCGCCAAGATCGAGCTGCAGGAGGTCGTGGACTTCCTCAAGTCGCCCGACAAGTACACCGAGCTCGGCGCAAAGATCCCCAAGGGCGTGCTGCTTGTGGGCCCGCCGGGCACCGGCAAGACGCTGATCGCAAAGGCGGTCGCCGGCGAGGCCGGGGTGCCGTTCTTCGCGTGCGCGGCGAGCGAGTTCGTCGAGCTGTTTGTCGGCGTCGGCGCGAGCCGCGTGCGGGACCTGTTTGAGAAGGCA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_407211.p2 GENE.S_Transcript_407211~~S_Transcript_407211.p2 ORF type:3prime_partial len:121 (+),score=-6.77,AAA|PF00004.25|2.5e-15 S_Transcript_407211:2-361(+)
MGGMGGMGGSPMDFGKNKSKFSEVPDTGILFDDVAGVEGAKIELQEVVDFLKSPDKYTELGAKIPKGVLLVGPPGTGKTLIAKAVAGEAGVPFFACAASEFVELFVGVGASRVRDLFEKA

Click here to download the sequence:
Link to NCBI Protein BLAST