Transcript Information: S_Transcript_407321.p1


Annotated TAIR IDAT5G16486.1
Annotated Gene NameRNA-directed DNA polymerase (reverse transcriptase)-related family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:5383597-5384226 | Reverse length=209
E-Value8E-12
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.46689475851194
Replicate 20.77413296693034
Replicate 30.3235567733965
Condition 2: 8 Hour
Replicate 11.1223889640596
Replicate 20.58873285894017
Replicate 31.1218867160516
Condition 3: 24 Hour
Replicate 10.76648714002085
Replicate 21.1928321882288
Replicate 31.3274760213219


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_407321.p1 GENE.S_Transcript_407321~~S_Transcript_407321.p1 ORF type:complete len:114 (+),score=14.18,zf-RVT|PF13966.2|2.8e-19 S_Transcript_407321:578-919(+)
ATGCTGACTATTAGAGATGAGTTTGTTATTAAAGTTGGGGGCACTCAATCCTCGAGGCTAGTTCAAGCCTGGCTAGACACTAGAAATTTTTTTTCCGAGGCATATAAATTCTTCAGGGGAGAACATGAAAAGAAACATTGGGCAAGAACAATTTGGGATCAAGCTAATATGCCAAAGCATTCTATTATAGCAATGATGGCCATTTCACATGGCTTGCCTACACAGGACAATCTGGCCAAAAGAGGTATTTCACTGGCAAATAGATGTGCCCTCTGTTGCTGCAGTCAGGAGTCTGTTGAGCATTTGTACTTTATATGCTCTTATGCACAGGAGGTTTGGTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_407321.p1 GENE.S_Transcript_407321~~S_Transcript_407321.p1 ORF type:complete len:114 (+),score=14.18,zf-RVT|PF13966.2|2.8e-19 S_Transcript_407321:578-919(+)
MLTIRDEFVIKVGGTQSSRLVQAWLDTRNFFSEAYKFFRGEHEKKHWARTIWDQANMPKHSIIAMMAISHGLPTQDNLAKRGISLANRCALCCCSQESVEHLYFICSYAQEVW*

Click here to download the sequence:
Link to NCBI Protein BLAST