Transcript Information: S_Transcript_407489.p1


Annotated TAIR IDAT4G04650.1
Annotated Gene NameRNA-directed DNA polymerase (reverse transcriptase)-related family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr4:2353989-2355213 | Reverse length=332
E-Value4E-15
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.15383237708197
Replicate 20
Replicate 30.053302705443932
Condition 2: 8 Hour
Replicate 10.49307260848862
Replicate 20.064658522080135
Replicate 30.36963897580893
Condition 3: 24 Hour
Replicate 10.31567750708951
Replicate 20
Replicate 30.14579216419142


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_407489.p1 GENE.S_Transcript_407489~~S_Transcript_407489.p1 ORF type:complete len:346 (+),score=51.11,zf-RVT|PF13966.2|3.2e-13,zf-RVT|PF13966.2|1e+04 S_Transcript_407489:465-1502(+)
ATGGACCACCAAATATTTATCATATGCTGGGCAGAATTCAGCTTACAATCAGTGATGTTTGGCATACAAGCCTACTGGGCTCAAGTTACAATTCTACCTAAGAGAATCTTGAAACTGGTAGAAGCTGTCTGCAGAAGTTTTATTTGGACAGGGAAGGCTAATGTGAGTAAGAAAGCTTTGGTGGCTTGGGATAAAATCACCATCCCTAAGAAGAGTGGAGGATTAGGCCTACTGAATCTAGCTTGCTGGAACAAAGCTGCAATCAACAAGCTGTGCTGGGATTTTGCAAAGAAGAAGGATAAAGCCTGGATTCAATGGCTCCATGGGTACTATCCAGGGCTTGGTAACAATAGACAGATTCCTAAGAATTTGTCCTGGATGCTCCGGAAGATTGTACAACAGAGACAAGAAATTCAGGGTGTTCCGGATTGTCCTAGTCAGGGGAAAATGAGAATTCATTATTTTTACTCAAAGATGATGGAGAATGGTCCTACTGTGAAGTGGTATCAGCTGGTGTGGATAAACTTTGCTCAACCCAGAGCAAAAATGATTCTATGGTTAAACATGCTACAGAAGTTAATGACCAAAGATCGAGTTTGTAAATGGGATCCTAGCTGTGATCCAACTTGTTTACTCTGTAAAAGTGAGCTAGAGTCTAATGATCATCTCATGATCAAGTGCACTTTCAGTCTAGCAGTTTTCACTAAACTTTTGAGGGAGATTCGTATACCTTGGACAGCAGTGAATGACAGGCATCAGATGATTGAAAGGTGGCTACACATCAGTAGAGGGAAGCAACCAGTAGCTAGATGTGCCAAAGCTATATTGGCTGAGGGCTGCTATGCTATATGGAGGGAGAGAAACCAAAGGCTCTTTCAACATAAAGAGAAGGATGTAGACCAAATTGCTAGAGAAGTGCAGTTTATGGTTTATACGAGGGGATATACTATGAAGAATGTAGGAGAATTCTACAAAGTCTATCCTAATGTGTGTGTAATGCTGCATAATGAAGGAAAGGCTCTTGGAAACCCTTCCTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_407489.p1 GENE.S_Transcript_407489~~S_Transcript_407489.p1 ORF type:complete len:346 (+),score=51.11,zf-RVT|PF13966.2|3.2e-13,zf-RVT|PF13966.2|1e+04 S_Transcript_407489:465-1502(+)
MDHQIFIICWAEFSLQSVMFGIQAYWAQVTILPKRILKLVEAVCRSFIWTGKANVSKKALVAWDKITIPKKSGGLGLLNLACWNKAAINKLCWDFAKKKDKAWIQWLHGYYPGLGNNRQIPKNLSWMLRKIVQQRQEIQGVPDCPSQGKMRIHYFYSKMMENGPTVKWYQLVWINFAQPRAKMILWLNMLQKLMTKDRVCKWDPSCDPTCLLCKSELESNDHLMIKCTFSLAVFTKLLREIRIPWTAVNDRHQMIERWLHISRGKQPVARCAKAILAEGCYAIWRERNQRLFQHKEKDVDQIAREVQFMVYTRGYTMKNVGEFYKVYPNVCVMLHNEGKALGNPS*

Click here to download the sequence:
Link to NCBI Protein BLAST