Transcript Information: S_Transcript_407489.p3


Annotated TAIR IDATMG01250.1
Annotated Gene NameRNA-directed DNA polymerase (reverse transcriptase)
Annotated Gene Symbol(s)ORF102
Annotation TypeHomolog
Chromosome PositionchrM:310514-310882 | Forward length=122
E-Value0.0005
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10
Replicate 20.24514210619461
Replicate 30.61475786945335
Condition 2: 8 Hour
Replicate 10.23694878130148
Replicate 20
Replicate 30
Condition 3: 24 Hour
Replicate 10
Replicate 20
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_407489.p3 GENE.S_Transcript_407489~~S_Transcript_407489.p3 ORF type:5prime_partial len:90 (+),score=12.48,RVT_1|PF00078.23|1.1e-05,RVT_1|PF00078.23|1.3e+02 S_Transcript_407489:2-271(+)
GAACTAACTGAGAAGTTTGAGGCTCAGAAGGGGTTGAGGCAAGGGGACCCTTTATCTCCTTATCTTTTTGTTATTGCCATGGAATATCTGAATCGATGCCTTAAGGAAATGTGTGTGAACCCAGACTTCAATTCCATCCAAAATGCCAGAAGATTAAACTCACCCATCTTGTATTTGCTGATGACCTTATGCTTTTTGCAAGGGGTGACCAAAGATCAGTTCAGCTGCTATATGAAGCATTTGAGAAATTTTCTAAAGCCTCTGGTCTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_407489.p3 GENE.S_Transcript_407489~~S_Transcript_407489.p3 ORF type:5prime_partial len:90 (+),score=12.48,RVT_1|PF00078.23|1.1e-05,RVT_1|PF00078.23|1.3e+02 S_Transcript_407489:2-271(+)
ELTEKFEAQKGLRQGDPLSPYLFVIAMEYLNRCLKEMCVNPDFNSIQNARRLNSPILYLLMTLCFLQGVTKDQFSCYMKHLRNFLKPLV*

Click here to download the sequence:
Link to NCBI Protein BLAST