Transcript Information: S_Transcript_407533.p1


Annotated TAIR IDAT2G02520.1
Annotated Gene NameRNA-directed DNA polymerase (reverse transcriptase)-related family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr2:676771-678145 | Reverse length=211
E-Value3E-11
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.60829717108984
Replicate 20.2521461663716
Replicate 30.10538706333486
Condition 2: 8 Hour
Replicate 10.97487498592608
Replicate 21.1505522157574
Replicate 31.2180484345704
Condition 3: 24 Hour
Replicate 10.12482790566054
Replicate 20.25901498944397
Replicate 30.14412596802923


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_407533.p1 GENE.S_Transcript_407533~~S_Transcript_407533.p1 ORF type:complete len:175 (+),score=28.00,zf-RVT|PF13966.2|1.6e-17 S_Transcript_407533:758-1282(+)
ATGTATGACAAATGGAGACATAAGGGGGTTAAGAGATACTGGACTAAACTGATCTGGTCAAATTGTGCATTGCCAAGAAGCCAGTTTATTGCGTGGATGGCTTTTCACAGAAAACTGAAGACCAAGGCAAGGTTGAAGAAGCTTGGAATTCTTAAGGAGGATTTGTGCACCATGTGCGGGACTAAACTCGAAACTTGTGATCACTTATTTTTCTCATGTTCTGTTAGTTCTGAAGTTTGGGGTAGGCTGCTTGGATGGGCAGGAGTTTGCAGAGATGTCTATTGCTTGCAGAAGAAATTTAAGTGGTTCATGAAGAGGGGAAAGAACAAGCCAGTTATCCAACAACTGAGGAGGACCCTCCTTGTTCTAACAATTGCAGAGCTATGGCATGAAAGGAATTTACAGCTGTTCCAGAATACTTCAAGACATCCTGATATCATAATCCGGCAGGTGAAGATACAGTGTTGTATTAAGATAATGCAGAAGAATGGACAACAGGCAGATGTTTGCAGAATATTAGACTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_407533.p1 GENE.S_Transcript_407533~~S_Transcript_407533.p1 ORF type:complete len:175 (+),score=28.00,zf-RVT|PF13966.2|1.6e-17 S_Transcript_407533:758-1282(+)
MYDKWRHKGVKRYWTKLIWSNCALPRSQFIAWMAFHRKLKTKARLKKLGILKEDLCTMCGTKLETCDHLFFSCSVSSEVWGRLLGWAGVCRDVYCLQKKFKWFMKRGKNKPVIQQLRRTLLVLTIAELWHERNLQLFQNTSRHPDIIIRQVKIQCCIKIMQKNGQQADVCRILD*

Click here to download the sequence:
Link to NCBI Protein BLAST