Transcript Information: S_Transcript_40755.p1


Annotated TAIR IDAT1G75560.1
Annotated Gene Namezinc knuckle (CCHC-type) family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:28371420-28372717 | Reverse length=257
E-Value7E-48
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 16.0372086135363
Replicate 24.8006995796444
Replicate 36.4037278068058
Condition 2: 8 Hour
Replicate 18.7868506399298
Replicate 212.221658053184
Replicate 38.3881807704788
Condition 3: 24 Hour
Replicate 17.3827615500619
Replicate 27.4496788051883
Replicate 36.7725859976701


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_40755.p1 GENE.S_Transcript_40755~~S_Transcript_40755.p1 ORF type:complete len:216 (+),score=14.48,zf-CCHC|PF00098.19|50,zf-CCHC|PF00098.19|4.2e-05,zf-CCHC|PF00098.19|8.2e-07,zf-CCHC|PF00098.19|0.0011,zf-CCHC|PF00098.19|6.1e-05,zf-CCHC|PF00098.19|0.0004,zf-CCHC|PF00098.19|0.00063,zf-CCHC|PF00098.19|0.00043,zf-CCHC_3|PF13917.2|0.033,zf-CCHC_3|PF13917.2|0.076,zf-CCHC_3|PF13917.2|0.25,zf-CCHC_3|PF13917.2|0.17,zf-CCHC_3|PF13917.2|28,zf-CCHC_3|PF13917.2|0.0056,zf-CCHC_3|PF13917.2|0.0034,zf-CCHC_4|PF14392.2|36,zf-CCHC_4|PF14392.2|0.0043,zf-CCHC_4|PF14392.2|1.9,zf-CCHC_4|PF14392.2|81,zf-CCHC_4|PF14392.2|0.014,zf-CCHC_4|PF14392.2|0.83,zf-CCHC_4|PF14392.2|0.41,zf-CCHC_2|PF13696.2|51,zf-CCHC_2|PF13696.2|0.013,zf-CCHC_2|PF13696.2|0.11,zf-CCHC_2|PF13696.2|0.54,zf-CCHC_2|PF13696.2|0.043,zf-CCHC_2|PF13696.2|12,zf-CCHC_2|PF13696.2|22 S_Transcript_40755:159-806(+)
ATGGATGCTAACAGGGATACAGGAGGTAGAGTATTCCGAAACAAGGAGCGGGCATCCTATGCACCATACCAAAAGGATCGTCGGAGTTTCAGGCACATGGCTGCTGACTGTAACTCGAAAACGATGTGTTGGAATTGCAAAGAACCAGGGCATCTGTCGACGGAATGCAAGAACCAGCCTATTTGTCACTCGTGTGGGAAGATGGGCCATTTAGCTCGTGAATGTCCGAAATCAAGCGATCCTAGAGTTTGCAGCAACTGTTTCCAACCAGGGCATTTGGCAGCAGACTGCATCAATGAAAAGGCATGTAACAAGTGCCGGAAGCCCGGCCACCTTGCTCGTGACTGTCTCAACGAACCCATTTGCAATATCTGCAACATTACAGGACATGTAGCCCGTCAATGTCCCAACTCCGCTCTTCCACCACCGTTTGCACCACCTCCTATGGTAGGGGGCTCACCCCCTCTTCCACCCCCAATGATTGGGGGCCCATATCCAGATATTTTCTGCCGGAGCTGTGGTCGTCCAGGTCATATAAGTCATCAGTGCATGTATATGGTCATGTGCAGCACCTGTGGTGGTCGTGGTCATCGTGCATTTGAGTGCCCCTCTGGCCCGATGCTTGATATGGTCTATCATCGTTATTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_40755.p1 GENE.S_Transcript_40755~~S_Transcript_40755.p1 ORF type:complete len:216 (+),score=14.48,zf-CCHC|PF00098.19|50,zf-CCHC|PF00098.19|4.2e-05,zf-CCHC|PF00098.19|8.2e-07,zf-CCHC|PF00098.19|0.0011,zf-CCHC|PF00098.19|6.1e-05,zf-CCHC|PF00098.19|0.0004,zf-CCHC|PF00098.19|0.00063,zf-CCHC|PF00098.19|0.00043,zf-CCHC_3|PF13917.2|0.033,zf-CCHC_3|PF13917.2|0.076,zf-CCHC_3|PF13917.2|0.25,zf-CCHC_3|PF13917.2|0.17,zf-CCHC_3|PF13917.2|28,zf-CCHC_3|PF13917.2|0.0056,zf-CCHC_3|PF13917.2|0.0034,zf-CCHC_4|PF14392.2|36,zf-CCHC_4|PF14392.2|0.0043,zf-CCHC_4|PF14392.2|1.9,zf-CCHC_4|PF14392.2|81,zf-CCHC_4|PF14392.2|0.014,zf-CCHC_4|PF14392.2|0.83,zf-CCHC_4|PF14392.2|0.41,zf-CCHC_2|PF13696.2|51,zf-CCHC_2|PF13696.2|0.013,zf-CCHC_2|PF13696.2|0.11,zf-CCHC_2|PF13696.2|0.54,zf-CCHC_2|PF13696.2|0.043,zf-CCHC_2|PF13696.2|12,zf-CCHC_2|PF13696.2|22 S_Transcript_40755:159-806(+)
MDANRDTGGRVFRNKERASYAPYQKDRRSFRHMAADCNSKTMCWNCKEPGHLSTECKNQPICHSCGKMGHLARECPKSSDPRVCSNCFQPGHLAADCINEKACNKCRKPGHLARDCLNEPICNICNITGHVARQCPNSALPPPFAPPPMVGGSPPLPPPMIGGPYPDIFCRSCGRPGHISHQCMYMVMCSTCGGRGHRAFECPSGPMLDMVYHRY*

Click here to download the sequence:
Link to NCBI Protein BLAST