Transcript Information: S_Transcript_407567.p2


Annotated TAIR IDAT1G57870.3
Annotated Gene Nameshaggy-like kinase 42
Annotated Gene Symbol(s)SK42
Annotation TypeOrtholog
Chromosome Positionchr1:21431138-21434877 | Reverse length=443
E-Value8.4E-23
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 124.418114535372
Replicate 221.60788668004
Replicate 322.055230780388
Condition 2: 8 Hour
Replicate 134.296504015183
Replicate 248.895174346619
Replicate 333.841654960486
Condition 3: 24 Hour
Replicate 129.501852961524
Replicate 227.103114874807
Replicate 328.082276244872


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_407567.p2 GENE.S_Transcript_407567~~S_Transcript_407567.p2 ORF type:5prime_partial len:97 (+),score=15.51 S_Transcript_407567:1-291(+)
AAGGAAAGAAAGATTATGAAGTTGCTACATGAAGCCAAGAACGCCACACCACCTGAAAGGAAGACTGCTTTGAGACATCTCATTGGTTTGGTTAATCCTCATATACATCAGTTGAAAATTTATGACTTCGGAAGTGCTAAAATCCTGGTGAAAGGAAAGCCAAACATTTCGTATATATGCTCTAGGTATTACCGTGTCGTTCCAAAACATATATTTAGAGCAACAGAGTACATCGCAACAATTGATGGTTTGCAGGATGTGTTCTTGTTGAGCTATTGCTTGGACAAGTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_407567.p2 GENE.S_Transcript_407567~~S_Transcript_407567.p2 ORF type:5prime_partial len:97 (+),score=15.51 S_Transcript_407567:1-291(+)
KERKIMKLLHEAKNATPPERKTALRHLIGLVNPHIHQLKIYDFGSAKILVKGKPNISYICSRYYRVVPKHIFRATEYIATIDGLQDVFLLSYCLDK*

Click here to download the sequence:
Link to NCBI Protein BLAST