Transcript Information: S_Transcript_40758.p1


Annotated TAIR IDAT1G75560.1
Annotated Gene Namezinc knuckle (CCHC-type) family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:28371420-28372717 | Reverse length=257
E-Value2E-66
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 122.213271192268
Replicate 218.237386529397
Replicate 316.732321043589
Condition 2: 8 Hour
Replicate 121.669348225474
Replicate 221.379548901674
Replicate 319.854680632059
Condition 3: 24 Hour
Replicate 118.497683600906
Replicate 217.272017693265
Replicate 316.272286712978


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_40758.p1 GENE.S_Transcript_40758~~S_Transcript_40758.p1 ORF type:complete len:248 (+),score=18.63,zf-CCHC|PF00098.19|3.4e-06,zf-CCHC|PF00098.19|3.5e-06,zf-CCHC|PF00098.19|5e-05,zf-CCHC|PF00098.19|9.8e-07,zf-CCHC|PF00098.19|0.0013,zf-CCHC|PF00098.19|7.3e-05,zf-CCHC|PF00098.19|0.00048,zf-CCHC|PF00098.19|0.00075,zf-CCHC|PF00098.19|0.00083,zf-CCHC_3|PF13917.2|0.014,zf-CCHC_3|PF13917.2|0.51,zf-CCHC_3|PF13917.2|0.2,zf-CCHC_3|PF13917.2|0.092,zf-CCHC_3|PF13917.2|0.3,zf-CCHC_3|PF13917.2|0.38,zf-CCHC_3|PF13917.2|34,zf-CCHC_3|PF13917.2|0.0068,zf-CCHC_3|PF13917.2|0.0042,zf-CCHC_2|PF13696.2|1.8e-05,zf-CCHC_2|PF13696.2|1,zf-CCHC_2|PF13696.2|60,zf-CCHC_2|PF13696.2|0.015,zf-CCHC_2|PF13696.2|0.14,zf-CCHC_2|PF13696.2|0.64,zf-CCHC_2|PF13696.2|0.051,zf-CCHC_2|PF13696.2|14,zf-CCHC_2|PF13696.2|27,zf-CCHC_4|PF14392.2|0.98,zf-CCHC_4|PF14392.2|0.58,zf-CCHC_4|PF14392.2|43,zf-CCHC_4|PF14392.2|0.0051,zf-CCHC_4|PF14392.2|2.3,zf-CCHC_4|PF14392.2|96,zf-CCHC_4|PF14392.2|0.016,zf-CCHC_4|PF14392.2|0.98,zf-CCHC_4|PF14392.2|0.49 S_Transcript_40758:143-886(+)
ATGGATGCTGCTAACAGGGATACAGGAGGTAGAGTATTCCGAAACAAGGAGCGGGCATCCTATGCACCATACCAAAAGGATCGTCGGAGTTTCAGGCAAAGTTATCTGTGCAAGAACTGCAAGCGCCCAGGTCATTTTGCCAGGGAGTGTCCAAACGACTCCGTGTGCAACAATTGTGGCCAAGCTGGGCACATGGCTGCTGACTGTAACTCGAAAACGATGTGTTGGAATTGCAAAGAACCAGGGCATCTGTCGACGGAATGCAAGAACCAGCCTATTTGTCACTCGTGTGGGAAGATGGGCCATTTAGCTCGTGAATGTCCGAAATCAAGCGATCCTAGAGTTTGCAGCAACTGTTTCCAACCAGGGCATTTGGCAGCAGACTGCATCAATGAAAAGGCATGTAACAAGTGCCGGAAGCCCGGCCACCTTGCTCGTGACTGTCTCAACGAACCCATTTGCAATATCTGCAACATTACAGGACATGTAGCCCGTCAATGTCCCAACTCCGCTCTTCCACCACCGTTTGCACCACCTCCTATGGTAGGGGGCTCACCCCCTCTTCCACCCCCAATGATTGGGGGCCCATATCCAGATATTTTCTGCCGGAGCTGTGGTCGTCCAGGTCATATAAGTCATCAGTGCATGTATATGGTCATGTGCAGCACCTGTGGTGGTCGTGGTCATCGTGCATTTGAGTGCCCCTCTGGCCCGATGCTTGATATGGTCTATCATCGTTATTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_40758.p1 GENE.S_Transcript_40758~~S_Transcript_40758.p1 ORF type:complete len:248 (+),score=18.63,zf-CCHC|PF00098.19|3.4e-06,zf-CCHC|PF00098.19|3.5e-06,zf-CCHC|PF00098.19|5e-05,zf-CCHC|PF00098.19|9.8e-07,zf-CCHC|PF00098.19|0.0013,zf-CCHC|PF00098.19|7.3e-05,zf-CCHC|PF00098.19|0.00048,zf-CCHC|PF00098.19|0.00075,zf-CCHC|PF00098.19|0.00083,zf-CCHC_3|PF13917.2|0.014,zf-CCHC_3|PF13917.2|0.51,zf-CCHC_3|PF13917.2|0.2,zf-CCHC_3|PF13917.2|0.092,zf-CCHC_3|PF13917.2|0.3,zf-CCHC_3|PF13917.2|0.38,zf-CCHC_3|PF13917.2|34,zf-CCHC_3|PF13917.2|0.0068,zf-CCHC_3|PF13917.2|0.0042,zf-CCHC_2|PF13696.2|1.8e-05,zf-CCHC_2|PF13696.2|1,zf-CCHC_2|PF13696.2|60,zf-CCHC_2|PF13696.2|0.015,zf-CCHC_2|PF13696.2|0.14,zf-CCHC_2|PF13696.2|0.64,zf-CCHC_2|PF13696.2|0.051,zf-CCHC_2|PF13696.2|14,zf-CCHC_2|PF13696.2|27,zf-CCHC_4|PF14392.2|0.98,zf-CCHC_4|PF14392.2|0.58,zf-CCHC_4|PF14392.2|43,zf-CCHC_4|PF14392.2|0.0051,zf-CCHC_4|PF14392.2|2.3,zf-CCHC_4|PF14392.2|96,zf-CCHC_4|PF14392.2|0.016,zf-CCHC_4|PF14392.2|0.98,zf-CCHC_4|PF14392.2|0.49 S_Transcript_40758:143-886(+)
MDAANRDTGGRVFRNKERASYAPYQKDRRSFRQSYLCKNCKRPGHFARECPNDSVCNNCGQAGHMAADCNSKTMCWNCKEPGHLSTECKNQPICHSCGKMGHLARECPKSSDPRVCSNCFQPGHLAADCINEKACNKCRKPGHLARDCLNEPICNICNITGHVARQCPNSALPPPFAPPPMVGGSPPLPPPMIGGPYPDIFCRSCGRPGHISHQCMYMVMCSTCGGRGHRAFECPSGPMLDMVYHRY*

Click here to download the sequence:
Link to NCBI Protein BLAST