Transcript Information: S_Transcript_407620.p1


Annotated TAIR IDAT1G02050.1
Annotated Gene NameChalcone and stilbene synthase family protein
Annotated Gene Symbol(s)LAP6
Annotation TypeOrtholog
Chromosome Positionchr1:359164-360441 | Reverse length=395
E-Value1.3E-169
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.16427778540235
Replicate 20
Replicate 30.056922024949385
Condition 2: 8 Hour
Replicate 10.19745731775123
Replicate 20.20714674666413
Replicate 30.13157930620359
Condition 3: 24 Hour
Replicate 10.13484495981848
Replicate 20.2098501071884
Replicate 30.54492071245621


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_407620.p1 GENE.S_Transcript_407620~~S_Transcript_407620.p1 ORF type:5prime_partial len:324 (+),score=46.69,Chal_sti_synt_N|PF00195.15|3.7e-68,Chal_sti_synt_N|PF00195.15|1.9e+03,Chal_sti_synt_C|PF02797.11|5.3e-66,FAE1_CUT1_RppA|PF08392.8|3.3e-07,ACP_syn_III|PF08545.6|6.5e-07 S_Transcript_407620:3-974(+)
CAAGACGACTACTGTCAAGACGAGATATACAGTCATGTCGAAGGAGATTCTAGAAAACTATCCAGAGCTAGCAACCGAGGGCTCACCAACAATCAAGCAAAGGCTAGAAATAGCAAATCCAGCTGTGGTAGAAATGGCCTCGAAGCCAGTCTTGCTTGCATCAAGGAATGGGGCCGACCTGCTCAAGACATAACCCATATTGTCTATGTTTCCTCGAGTGAGATAAGATTACCTGGAGGTGACCTGTATCTCGCAACTGAGCTGGGGCTAAGGCCTGATGTAGGCCGAGTCATGCTCTACTTCCTTGGTTGTTACGGTGGGGTAACAGGCCTGAGAGTCGCCAAGGACATTGCTGAGAACAACCCGGGCAGTAGGGTCCTTGTCACCACCTCTGAAACCACCATCCTGGGCTTCCGACCCCCTAACAAGGCTCGACCATATGACCTTGTTGGGGCAGCCCTGTTTGGTGACGGAGCAGCAGCTGTCATAATCGGATCAGACCCGCATTTAAGCCAGGAGAGCCCATTTATGGAGCTCCACTACGCAGTCCAACAGTTCTTACCCGCGACCCACAATGTGATCAACGGGTGCCTCACTGAAGAAGGAATAAACTTCAAACTAGGTAGGGACTTGCCTCAGAAAATCGAGGACAACATTGAGGAGTTTTGCAAGAAGCTCATGTCGAAAGGAGGGGTGACCGAGTACAATGACTTGTTCTGGGCCGTTCATCCCGGTGGTCCAGCAATACTGAATAAGTTGGAGAATACTCTGAATTTAAGAGCAGAGAAGTTGGATTGTAGTAGAAGGGCTTTGATGGATTTCGGGAACGTGAGTAGCAACACTATCTTTTATGTAATGGAGTATATGAGGAATGAGTTGAAGAGCAAAGGAGGGTTAGCTGAAGAATGGGGACTTGGCTTGGCATTTGGCCCTGGGATTACCTTTGAAGGCCTCCTCTTACGTAGCCTTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_407620.p1 GENE.S_Transcript_407620~~S_Transcript_407620.p1 ORF type:5prime_partial len:324 (+),score=46.69,Chal_sti_synt_N|PF00195.15|3.7e-68,Chal_sti_synt_N|PF00195.15|1.9e+03,Chal_sti_synt_C|PF02797.11|5.3e-66,FAE1_CUT1_RppA|PF08392.8|3.3e-07,ACP_syn_III|PF08545.6|6.5e-07 S_Transcript_407620:3-974(+)
QDDYCQDEIYSHVEGDSRKLSRASNRGLTNNQAKARNSKSSCGRNGLEASLACIKEWGRPAQDITHIVYVSSSEIRLPGGDLYLATELGLRPDVGRVMLYFLGCYGGVTGLRVAKDIAENNPGSRVLVTTSETTILGFRPPNKARPYDLVGAALFGDGAAAVIIGSDPHLSQESPFMELHYAVQQFLPATHNVINGCLTEEGINFKLGRDLPQKIEDNIEEFCKKLMSKGGVTEYNDLFWAVHPGGPAILNKLENTLNLRAEKLDCSRRALMDFGNVSSNTIFYVMEYMRNELKSKGGLAEEWGLGLAFGPGITFEGLLLRSL*

Click here to download the sequence:
Link to NCBI Protein BLAST