Transcript Information: S_Transcript_407624.p1


Annotated TAIR IDAT3G58590.1
Annotated Gene NamePentatricopeptide repeat (PPR) superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr3:21666262-21668487 | Forward length=741
E-Value7E-24
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.22177501029317
Replicate 20.55156973893787
Replicate 30.61475786945335
Condition 2: 8 Hour
Replicate 11.4216926878089
Replicate 20.93216035998861
Replicate 31.0657923802491
Condition 3: 24 Hour
Replicate 11.6383662617946
Replicate 20.94432548234781
Replicate 30.84073481350387


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_407624.p1 GENE.S_Transcript_407624~~S_Transcript_407624.p1 ORF type:5prime_partial len:120 (+),score=19.21,PPR|PF01535.16|0.00066,PPR|PF01535.16|3.2e-05,PPR_2|PF13041.2|5.6e+02,PPR_2|PF13041.2|0.088,PPR_2|PF13041.2|0.0033 S_Transcript_407624:1-360(+)
TTTTGTGGTATGTGGGGTTGTGGTTTTGGACCGACCCAGTTCACTTTTGGTGGTCTTTTGTCATGTCATGGTTTGGACTTAAGGAGAGGAGGAGTTATGCATGGGTTAGTGTTGAAAAATGGGTTGTTTTTCTCTGACCCTTATGTAGGGACTGCATTTTTAGGTATGTTTGGAAGAAATGGATTTATTGATGAGGTAATGAGAGTCTTTGAAGATATGCCTAGGAAGAATGTGGTCACATGGAATTCTGTTATTTCTTTGTTGGGATATCATGGGTTTGTCGAAGAGTCAATAGTAATGTTTTGCAAGCTCTTGAGATCTGGACATGGTGTTGGGGAATTTATCGGAATAGGGACATAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_407624.p1 GENE.S_Transcript_407624~~S_Transcript_407624.p1 ORF type:5prime_partial len:120 (+),score=19.21,PPR|PF01535.16|0.00066,PPR|PF01535.16|3.2e-05,PPR_2|PF13041.2|5.6e+02,PPR_2|PF13041.2|0.088,PPR_2|PF13041.2|0.0033 S_Transcript_407624:1-360(+)
FCGMWGCGFGPTQFTFGGLLSCHGLDLRRGGVMHGLVLKNGLFFSDPYVGTAFLGMFGRNGFIDEVMRVFEDMPRKNVVTWNSVISLLGYHGFVEESIVMFCKLLRSGHGVGEFIGIGT*

Click here to download the sequence:
Link to NCBI Protein BLAST