Transcript Information: S_Transcript_407625.p1


Annotated TAIR IDAT3G58590.1
Annotated Gene NamePentatricopeptide repeat (PPR) superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr3:21666262-21668487 | Forward length=741
E-Value4E-100
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.18481250857764
Replicate 20.25535636061938
Replicate 30.38422366840834
Condition 2: 8 Hour
Replicate 10.74046494156712
Replicate 21.1393071066527
Replicate 31.2335559956586
Condition 3: 24 Hour
Replicate 10.6573691791151
Replicate 20.1573875803913
Replicate 30.17515308614664


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_407625.p1 GENE.S_Transcript_407625~~S_Transcript_407625.p1 ORF type:internal len:432 (+),score=69.39,PPR_2|PF13041.2|3.6e+03,PPR_2|PF13041.2|0.54,PPR_2|PF13041.2|0.0024,PPR_2|PF13041.2|0.34,PPR_2|PF13041.2|6.3e-07,PPR_2|PF13041.2|3.2e+02,PPR_2|PF13041.2|1.7e-07,PPR_2|PF13041.2|2.1,PPR_2|PF13041.2|0.0043,PPR|PF01535.16|0.0042,PPR|PF01535.16|0.00022,PPR|PF01535.16|3.7e+03,PPR|PF01535.16|0.63,PPR|PF01535.16|0.14,PPR|PF01535.16|2.7e+03,PPR|PF01535.16|1.7,PPR|PF01535.16|87,PPR|PF01535.16|1.2e+02,PPR|PF01535.16|0.015,PPR|PF01535.16|1.1e+03,PPR|PF01535.16|0.0073,PPR_1|PF12854.3|3.2,PPR_1|PF12854.3|1.2,PPR_1|PF12854.3|1.2e+02,PPR_1|PF12854.3|0.0029,PPR_1|PF12854.3|75,PPR_1|PF12854.3|1.4e+03,PPR_1|PF12854.3|67,PPR_1|PF12854.3|4e+03,PPR_1|PF12854.3|91,PPR_1|PF12854.3|0.028,PPR_1|PF12854.3|0.0078,PPR_3|PF13812.2|2.9,PPR_3|PF13812.2|6.5e+02,PPR_3|PF13812.2|9.2e+02,PPR_3|PF13812.2|19,PPR_3|PF13812.2|4.4e+03,PPR_3|PF13812.2|4.5e+03,PPR_3|PF13812.2|14,PPR_3|PF13812.2|2.1,PPR_3|PF13812.2|0.5 S_Transcript_407625:1-1293(+)
TTTTGTGGTATGTGGGGTTGTGGTTTTGGACCGACCCAGTTCACTTTTGGTGGTCTTTTGTCATGTCATGGTTTGGACTTAAGGAGAGGAGGAGTTATGCATGGGTTAGTGTTGAAAAATGGGTTGTTTTTCTCTGACCCTTATGTAGGGACTGCATTTTTAGGTATGTTTGGAAGAAATGGATTTATTGATGAGGTAATGAGAGTCTTTGAAGATATGCCTAGGAAGAATGTGGTCACATGGAATTCTGTTATTTCTTTGTTGGGATATCATGGGTTTGTCGAAGAGTCAATAGTAATGTTTTGCAAGCTCTTGAGATCTGGACATGGTCTTACTGGGAGCACTATAGTGGGATTGTTGTCTGGTTTTGTGGCTCTGGAAGATTTTGAATTAGGCCATCAAGTACATAGCCTAGTGATTAAAAATGGTTTAAGTTGTGATGTTTCTGCTTCCAATGCCCTGCTTAACATGTTTGTCAAGTGTATGGACTTATCTTCTGCTGAAAGAATGTTCGAGGAGGTCTGTTTTCGGGATGTTGTGACGTATAATACCTTAATTGGAGCATTGGCAAGAGGTGAGACACCTGGTAAGGGATTAGAGCTGCTTTTGTCTTTGCTCGCTGAAGGAATGAGGCCTAACAACATCACATATGTCGGTGTCATCAATTGTTGTGCTAATCTGCGAATACCAACCTGTGGAGAATATATTCATGCTAAGGTGATAAGAAACTCATTCCAAAGTGATGTTTTTGTGGGTAGTTCATTGGTTGACTTTTATGGAAAATGTGATATGCTGAACTCTGCTCAATCTTGTTTTGATGACATACTTGATAAAAATGTGGTTTCATGGAACAGTGTAATAAGGGCTCATACCTTTAAGAGTCAAGACATTGCCAAAGTTTTGTTTCAAGAGATGCTGCGGTTGGGTCATTGTCCTAATGAGAGTACATTTTCTACTGTGTTGAAAGTGTCTTCTGTCTTTGAACTACAGCAGCTCCATTGTTTGACGATAAAATTGGGTTACCTTAGAATGGTATACGTGTTTACATCACTTATTACCTCGTATGCCAAAAATGGATTAGTATCAGATGCATTGCTGATTACCAAATGTATTGAGATGCCACTTTCAGTGGTTTCCTCCAATGTCATAGCTGCTACTTACAATAGAGCGGGTCAATATGATAAATCTCTGGAGAAGCTTTCTGGAGTTGATGAACCTGACATTATCTCATGGAATATTCTTGTGTCCACTTGTTCTCATAGTGGTCATCATAAGGAAGCATTTGAGCTTTTC

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_407625.p1 GENE.S_Transcript_407625~~S_Transcript_407625.p1 ORF type:internal len:432 (+),score=69.39,PPR_2|PF13041.2|3.6e+03,PPR_2|PF13041.2|0.54,PPR_2|PF13041.2|0.0024,PPR_2|PF13041.2|0.34,PPR_2|PF13041.2|6.3e-07,PPR_2|PF13041.2|3.2e+02,PPR_2|PF13041.2|1.7e-07,PPR_2|PF13041.2|2.1,PPR_2|PF13041.2|0.0043,PPR|PF01535.16|0.0042,PPR|PF01535.16|0.00022,PPR|PF01535.16|3.7e+03,PPR|PF01535.16|0.63,PPR|PF01535.16|0.14,PPR|PF01535.16|2.7e+03,PPR|PF01535.16|1.7,PPR|PF01535.16|87,PPR|PF01535.16|1.2e+02,PPR|PF01535.16|0.015,PPR|PF01535.16|1.1e+03,PPR|PF01535.16|0.0073,PPR_1|PF12854.3|3.2,PPR_1|PF12854.3|1.2,PPR_1|PF12854.3|1.2e+02,PPR_1|PF12854.3|0.0029,PPR_1|PF12854.3|75,PPR_1|PF12854.3|1.4e+03,PPR_1|PF12854.3|67,PPR_1|PF12854.3|4e+03,PPR_1|PF12854.3|91,PPR_1|PF12854.3|0.028,PPR_1|PF12854.3|0.0078,PPR_3|PF13812.2|2.9,PPR_3|PF13812.2|6.5e+02,PPR_3|PF13812.2|9.2e+02,PPR_3|PF13812.2|19,PPR_3|PF13812.2|4.4e+03,PPR_3|PF13812.2|4.5e+03,PPR_3|PF13812.2|14,PPR_3|PF13812.2|2.1,PPR_3|PF13812.2|0.5 S_Transcript_407625:1-1293(+)
FCGMWGCGFGPTQFTFGGLLSCHGLDLRRGGVMHGLVLKNGLFFSDPYVGTAFLGMFGRNGFIDEVMRVFEDMPRKNVVTWNSVISLLGYHGFVEESIVMFCKLLRSGHGLTGSTIVGLLSGFVALEDFELGHQVHSLVIKNGLSCDVSASNALLNMFVKCMDLSSAERMFEEVCFRDVVTYNTLIGALARGETPGKGLELLLSLLAEGMRPNNITYVGVINCCANLRIPTCGEYIHAKVIRNSFQSDVFVGSSLVDFYGKCDMLNSAQSCFDDILDKNVVSWNSVIRAHTFKSQDIAKVLFQEMLRLGHCPNESTFSTVLKVSSVFELQQLHCLTIKLGYLRMVYVFTSLITSYAKNGLVSDALLITKCIEMPLSVVSSNVIAATYNRAGQYDKSLEKLSGVDEPDIISWNILVSTCSHSGHHKEAFELF

Click here to download the sequence:
Link to NCBI Protein BLAST