Transcript Information: S_Transcript_407643.p1


Annotated TAIR IDAT1G77110.1
Annotated Gene NameAuxin efflux carrier family protein
Annotated Gene Symbol(s)PIN6
Annotation TypeOrtholog
Chromosome Positionchr1:28970855-28974408 | Forward length=570
E-Value6.8E-21
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.4006842755358
Replicate 20.53593820787485
Replicate 30.52266863394819
Condition 2: 8 Hour
Replicate 10.69070090095977
Replicate 20.36229714396318
Replicate 31.2081856942095
Condition 3: 24 Hour
Replicate 10.53064494309136
Replicate 20.64229425520013
Replicate 30.81690832081348


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_407643.p1 GENE.S_Transcript_407643~~S_Transcript_407643.p1 ORF type:internal len:247 (-),score=57.81,Mem_trans|PF03547.14|6.9e-24 S_Transcript_407643:3-740(-)
AGGAACTCCAATTTCGGGGCCAACGACCTATACAATCTTGGCCTCACCACCTCCCGAGGGCCGACTCCCCGGCCCTCCAACTTCGAGGAGGACACCAGCAATAGCAGGCCTAAGTATCCTGCTTTTGGTGGTGGTGGTGCTGGAGCTGGAACTCATTACCCGGCCCCGAACCCGGGGATGTTCTCTCCTACTAAGAAGGATGGGACTAACAATAACAATGTGAAGAAGGCTGTGAATGGACAAAAGGGAGGAGAAGAAGGGAATAAGGATCTTCACATGTTTGTATGGAGTTCAAGTGCTTCTCCTGTTTCTGAAGCTGGTTTGCATGTCTTTAGAGGTGGTGGTGCTACTGCTACTACTAATCCTGATTTTGGTGGTCATGATCTTGGCGGGGTAGCTCACCCTAAAGATTATGATGATTATGGAAGGGATGAGTTTAGCTTTGGGAATAGGCCCGGTGGGCCGGAAGGGGAAGGCCCAACATTGTCAAAGCTCGGTTCGAGCTCGACCACCGAGCTCCGGCCCAAGGCAGCTGCTCAGGGTGAATCCAAACCAACTTCTATGCCCCCTGCAAGTGTTATGACCAGGCTCATCTTGATCATGGTTTGGAGGAAACTTATCAGGAACCCTAACACATACTCTAGTCTCATTGGCCTTACTTGGTCCTTGATTGCTTTTAGGTGGAACATCAAAATGCCTGCCATTGTAGCGGGTTCGATCAAAATTCTCTCAGATGCA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_407643.p1 GENE.S_Transcript_407643~~S_Transcript_407643.p1 ORF type:internal len:247 (-),score=57.81,Mem_trans|PF03547.14|6.9e-24 S_Transcript_407643:3-740(-)
RNSNFGANDLYNLGLTTSRGPTPRPSNFEEDTSNSRPKYPAFGGGGAGAGTHYPAPNPGMFSPTKKDGTNNNNVKKAVNGQKGGEEGNKDLHMFVWSSSASPVSEAGLHVFRGGGATATTNPDFGGHDLGGVAHPKDYDDYGRDEFSFGNRPGGPEGEGPTLSKLGSSSTTELRPKAAAQGESKPTSMPPASVMTRLILIMVWRKLIRNPNTYSSLIGLTWSLIAFRWNIKMPAIVAGSIKILSDA

Click here to download the sequence:
Link to NCBI Protein BLAST