Transcript Information: S_Transcript_407770.p1


Annotated TAIR IDAT5G44650.1
Annotated Gene NameEncodes a nucleus-encoded thylakoid protein, cooperates with the plastid-encoded Ycf3 protein in photosystem i assembly. Also induces tolerance to multiple environmental stresses and reduces photooxidative damage.
Annotated Gene Symbol(s)CEST, AtCEST, Y3IP1
Annotation TypeOrtholog
Chromosome Positionchr5:18013396-18015292 | Forward length=280
E-Value4.7E-69
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 117.84636553418
Replicate 222.581914017692
Replicate 324.843450371438
Condition 2: 8 Hour
Replicate 120.823616427318
Replicate 221.187456652918
Replicate 321.817396960393
Condition 3: 24 Hour
Replicate 121.202386917341
Replicate 223.330394269769
Replicate 324.480219569672


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_407770.p1 GENE.S_Transcript_407770~~S_Transcript_407770.p1 ORF type:5prime_partial len:170 (-),score=54.53 S_Transcript_407770:258-767(-)
GGGGGTAACGCATTAACGGCAACAGCTGTTGAAGATGAGGAACCTACTCCAGAGGATCTCGATTATATTAGTCAAATTAAGACCGTACTGGAGTTGCTCAAGAAGAACAGGGACATGCTTTTTGGCGAGGTCAAATTGACAATTATGATTGAGGATCCCAGAGAAGTTGAGAGAAGAAGATTGCTAGGAATTGATGATTCTGATGCACCGACTAGGGATGATTTGGCTGCTGCTTTGGAAGAAGTGAATGAAGGAAGAGTTCCTAGAAACCGCATAGCCTTACAGATGCTTGCTGAGGAAATGACTAATTGGCCAAATTTGGAGGTTGAAACCCCAAAGAAAAAGACAAAGGGTAGATCACTCTATGCGAAAGCCACTGATACTGGTATTGATCCTGAAGTGGCTGCAAAGAGGCTCAATGTTGATTGGGATACAGCTGCTGAGATTGACGAAGAAGACGCTGATGAAACCGAAGTACCTTCGGCAGTGGTTCGTTTCTCTTTGTTGTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_407770.p1 GENE.S_Transcript_407770~~S_Transcript_407770.p1 ORF type:5prime_partial len:170 (-),score=54.53 S_Transcript_407770:258-767(-)
GGNALTATAVEDEEPTPEDLDYISQIKTVLELLKKNRDMLFGEVKLTIMIEDPREVERRRLLGIDDSDAPTRDDLAAALEEVNEGRVPRNRIALQMLAEEMTNWPNLEVETPKKKTKGRSLYAKATDTGIDPEVAAKRLNVDWDTAAEIDEEDADETEVPSAVVRFSLL*

Click here to download the sequence:
Link to NCBI Protein BLAST