Transcript Information: S_Transcript_407881.p1


Annotated TAIR IDAT4G39420.2
Annotated Gene Nameunknown protein; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: leaf; EXPRESSED DURING: LP.04 four leaves visible, LP.02 two leaves visible; Has 20 Blast hits to 19 proteins in 8 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 20; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr4:18339731-18354701 | Forward length=3184
E-Value5.4E-34
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.52699012346892
Replicate 21.9659911486894
Replicate 30.91300673681191
Condition 2: 8 Hour
Replicate 10.63342743516237
Replicate 21.5505241631494
Replicate 31.4773359726225
Condition 3: 24 Hour
Replicate 11.081429875772
Replicate 21.3463650441394
Replicate 30.74916963579553


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_407881.p1 GENE.S_Transcript_407881~~S_Transcript_407881.p1 ORF type:internal len:101 (-),score=19.55,Spatacsin_C|PF14649.2|4.8e-12 S_Transcript_407881:1-300(-)
ATATGTTTGGTAGTGTTGGTTTACTCTATCTTATCAACTCTAATTGCTGCTGTTTGTGATCATATATTTGTCTTGAATGTGTGGCAGGTCTACAATCACTTCGACATGAAGCATGAAACAGCTTTGTTACTGGAGTCACGAGCTGAACAATCTTATCAGCAGTGGCGCCTTCGCCACGACAAGGACCAAAATGAAGACCTCCTTGAGTCAATGTGTTATTACATTGAAGCAGCAGAAGTTCATTCATCCATTGATGCTGGTTACAAAACCCATTCTGCTTGTGCTCTAGCATCCCTTGTC

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_407881.p1 GENE.S_Transcript_407881~~S_Transcript_407881.p1 ORF type:internal len:101 (-),score=19.55,Spatacsin_C|PF14649.2|4.8e-12 S_Transcript_407881:1-300(-)
ICLVVLVYSILSTLIAAVCDHIFVLNVWQVYNHFDMKHETALLLESRAEQSYQQWRLRHDKDQNEDLLESMCYYIEAAEVHSSIDAGYKTHSACALASLV

Click here to download the sequence:
Link to NCBI Protein BLAST