Transcript Information: S_Transcript_407988.p1


Annotated TAIR IDAT3G51280.1
Annotated Gene NameTetratricopeptide repeat (TPR)-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr3:19037229-19038781 | Forward length=430
E-Value2E-09
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.644623671837
Replicate 21.7352755831753
Replicate 30.31083263062248
Condition 2: 8 Hour
Replicate 11.0782500722146
Replicate 20.87979180043869
Replicate 31.4370234340437
Condition 3: 24 Hour
Replicate 10
Replicate 20.7639487048207
Replicate 31.4169687868043


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_407988.p1 GENE.S_Transcript_407988~~S_Transcript_407988.p1 ORF type:5prime_partial len:178 (-),score=46.48 S_Transcript_407988:43-576(-)
GAAGATTTCCCAGATGAAAACACAAATTCCAATATCTTGCCAAGCAATAATGGTAGTATTAGCAGTAATCTAAATTTCCCACCTAAGCCAATTGGTGCTGGTAACTTCTTCTCTCTTGCAAATTCTTTGAACATTGATGCACCACCATATTACTCAACCAAATGTATGAGGGAGCCATTGGGAGTCACTCAATTTCCTGAGACCCTTAAGCGGACGAGGTCCGGGCATCTCGGGAGGGACAACAACAAACAAGGAGGGGAGACTAAAAAGATTAGTGATAATAATATTAGTACTAATCAGGAGAGGGAGAATAAGATGATGAGGAGATCACTTTCATTTGAGGAGCCTCTGGATAAATCACTAGATTTTCTGCCAGATGACAAGGACTTTGAAGAGGCTATTATTTCTGCAGTCCTGAGCACAATTGATTCTGAAAACAACAAGTCCAAGAAGGTTGAACTGAAGCCTTCTGCAACTGACAAAAGATTGAAGGTTTTTCAGGATATAACATTGTCCTTGAGTCCTAGGGCATAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_407988.p1 GENE.S_Transcript_407988~~S_Transcript_407988.p1 ORF type:5prime_partial len:178 (-),score=46.48 S_Transcript_407988:43-576(-)
EDFPDENTNSNILPSNNGSISSNLNFPPKPIGAGNFFSLANSLNIDAPPYYSTKCMREPLGVTQFPETLKRTRSGHLGRDNNKQGGETKKISDNNISTNQERENKMMRRSLSFEEPLDKSLDFLPDDKDFEEAIISAVLSTIDSENNKSKKVELKPSATDKRLKVFQDITLSLSPRA*

Click here to download the sequence:
Link to NCBI Protein BLAST