Transcript Information: S_Transcript_408066.p1


Annotated TAIR IDATMG01250.1
Annotated Gene NameRNA-directed DNA polymerase (reverse transcriptase)
Annotated Gene Symbol(s)ORF102
Annotation TypeHomolog
Chromosome PositionchrM:310514-310882 | Forward length=122
E-Value5E-11
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.33901912401504
Replicate 20
Replicate 30
Condition 2: 8 Hour
Replicate 10
Replicate 20.71247925604225
Replicate 30
Condition 3: 24 Hour
Replicate 10
Replicate 20.14435548774744
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_408066.p1 GENE.S_Transcript_408066~~S_Transcript_408066.p1 ORF type:3prime_partial len:157 (+),score=22.90,RVT_1|PF00078.23|5.5e-27 S_Transcript_408066:62-469(+)
ATGGAATGGGACTTTATTAGAAATATGCTTTTTACCTTCAATTTTGAATCCCACTCTATTAGGTTGATCATGGAATGCATTACTTCTATATCTACCTCTATCTTGGTTAATGGGGGCGCCACTGAGGAATTCCAACCCTCTCAGGGGCTCAGACAAGGGGACCCCTTGTCCCCCTATATCTTTATCCTGTGCATGGAGTTTCTCTCCAAACTCATCCATAATGCTTGTGAGGACAAATCCTGGAGCCCCTTCTCCTTTTCTAAATCTGGCCTAGTGATCTCCCACCTCCTTTTCGTGGATGATGTCATCCTCTTTGGAGAAGCAAATCTTAGTACCTTGGAAGCCATGGAATCCATCTTGAGTTTGTTTTGCCAAGCCTCTGGTCAAAAAGTCAATGCTAATAAAAGC

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_408066.p1 GENE.S_Transcript_408066~~S_Transcript_408066.p1 ORF type:3prime_partial len:157 (+),score=22.90,RVT_1|PF00078.23|5.5e-27 S_Transcript_408066:62-469(+)
MEWDFIRNMLFTFNFESHSIRLIMECITSISTSILVNGGATEEFQPSQGLRQGDPLSPYIFILCMEFLSKLIHNACEDKSWSPFSFSKSGLVISHLLFVDDVILFGEANLSTLEAMESILSLFCQASGQKVNANKS

Click here to download the sequence:
Link to NCBI Protein BLAST