Transcript Information: S_Transcript_408070.p1


Annotated TAIR IDATMG01250.1
Annotated Gene NameRNA-directed DNA polymerase (reverse transcriptase)
Annotated Gene Symbol(s)ORF102
Annotation TypeHomolog
Chromosome PositionchrM:310514-310882 | Forward length=122
E-Value4E-12
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.5089846061185
Replicate 21.7058857905295
Replicate 31.2358534489011
Condition 2: 8 Hour
Replicate 12.6381926165525
Replicate 22.8829701855318
Replicate 33.1863895904354
Condition 3: 24 Hour
Replicate 11.8016398755129
Replicate 21.7523565651815
Replicate 31.4301159198777


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_408070.p1 GENE.S_Transcript_408070~~S_Transcript_408070.p1 ORF type:internal len:194 (-),score=24.05,RVT_1|PF00078.23|2.7e-17,RVT_1|PF00078.23|1e+03 S_Transcript_408070:1-579(-)
GGGATCACTGAGGAGTTTAAACCTTCCCGGGGCCTGAGACAGGGAGACCCTCTCTCACCCTACATTTTCATCCTATGTATGGAGTTTTTATCAAAACTCATCCATAATGCTTGTGAAGAGGGAAATTGGTCCCCCTTCTCCTTCACTCACTCAGGCTTGTCCATCTCCCACCTCCTCTTTGCGGATGATGTCATCCTCTTTGGAGAGGCCAACCCCAGAACCCTAGCTGCTATGACCTCTACCTTACATTCCTTTTGCCAAGCCTCGGGTCAACAAATTAATGCAAGCAAAAGCAAATTGTTCTTCTGTCCAAACACTTCAGTTGAGATGATCCAGACCTTTGAGGGCTCCCTGGGCACTAGTGCTTCTGGAGACATAGGGACTTACCTTGGCCTACCTTTCACTATTAAGAGGCCCACAAAGAATCAGCTCAGAGGCATTGTGTCTAAAGTTAGGGATAGGCTTGCATCCTGGAAGACAAAATTCATCACGAAAGCTGGTAGGATGTGTCATATTAATGCTACACTTACTGCCATCCCAAATTACTACATGCATGGAATAACCCTCCCTAAAAGCCTG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_408070.p1 GENE.S_Transcript_408070~~S_Transcript_408070.p1 ORF type:internal len:194 (-),score=24.05,RVT_1|PF00078.23|2.7e-17,RVT_1|PF00078.23|1e+03 S_Transcript_408070:1-579(-)
GITEEFKPSRGLRQGDPLSPYIFILCMEFLSKLIHNACEEGNWSPFSFTHSGLSISHLLFADDVILFGEANPRTLAAMTSTLHSFCQASGQQINASKSKLFFCPNTSVEMIQTFEGSLGTSASGDIGTYLGLPFTIKRPTKNQLRGIVSKVRDRLASWKTKFITKAGRMCHINATLTAIPNYYMHGITLPKSL

Click here to download the sequence:
Link to NCBI Protein BLAST