Transcript Information: S_Transcript_408143.p1


Annotated TAIR IDAT5G28780.1
Annotated Gene NamePIF1 helicase
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:10812907-10814173 | Reverse length=337
E-Value6E-22
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.63364288655192
Replicate 20
Replicate 30.29274184259683
Condition 2: 8 Hour
Replicate 10.33849825900211
Replicate 20.71021741713418
Replicate 30.16917339369033
Condition 3: 24 Hour
Replicate 10
Replicate 20
Replicate 30.20017495559616


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_408143.p1 GENE.S_Transcript_408143~~S_Transcript_408143.p1 ORF type:complete len:126 (+),score=0.33,PIF1|PF05970.10|4.3e-20 S_Transcript_408143:1003-1380(+)
ATGTCAATGTTGAGGATATCAACTCCTATATGCTGTCCTTATTGCCCGGAGACGAGAGAGTATATAGAAGTTTTGATTCAATTTGTGTTGAGTGTTCAAGGGTCTGGTCATGATGAACTATATTCAACTGAGTACCTAAATAGTTTAAGGTGTTCTGGTTTGCCTAGCCACGAACTTACACTTAAAATAGGTACGCCAATCATGCTTCTTAGAAATATTGATTGCTCTGGTGGTTTATGTAATGGTACGCGATTACATATAACCAAGTTGGGTAACAATGTTATTGAAGCAGAGGTTCTCACCGGTAGTAGGATTGGAAATAGGGTCTTTATACCACGGTTTTCACTTACACCATCTAATACACATCTGCCGTTCTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_408143.p1 GENE.S_Transcript_408143~~S_Transcript_408143.p1 ORF type:complete len:126 (+),score=0.33,PIF1|PF05970.10|4.3e-20 S_Transcript_408143:1003-1380(+)
MSMLRISTPICCPYCPETREYIEVLIQFVLSVQGSGHDELYSTEYLNSLRCSGLPSHELTLKIGTPIMLLRNIDCSGGLCNGTRLHITKLGNNVIEAEVLTGSRIGNRVFIPRFSLTPSNTHLPF*

Click here to download the sequence:
Link to NCBI Protein BLAST