Transcript Information: S_Transcript_408346.p1


Annotated TAIR IDAT4G39530.1
Annotated Gene NameTetratricopeptide repeat (TPR)-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr4:18374736-18377240 | Reverse length=834
E-Value2E-16
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.3024204685816
Replicate 20
Replicate 30
Condition 2: 8 Hour
Replicate 10
Replicate 20
Replicate 30
Condition 3: 24 Hour
Replicate 10
Replicate 20
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_408346.p1 GENE.S_Transcript_408346~~S_Transcript_408346.p1 ORF type:internal len:88 (+),score=17.91,PPR|PF01535.16|0.00023,PPR|PF01535.16|1e-05,PPR|PF01535.16|2.2e+03,PPR_2|PF13041.2|0.0043,PPR_2|PF13041.2|8.5e-06,PPR_3|PF13812.2|0.0092,PPR_3|PF13812.2|4.4e-05,PPR_3|PF13812.2|1.2e+04,PPR_1|PF12854.3|0.0011,PPR_1|PF12854.3|0.25 S_Transcript_408346:2-262(+)
GGTACCGCTATGATTGATTTATATGCCAAAGTAGGTGATGTTGATGATGCGAGAGTGGTTTTTGATGAGCTCTCAGAGACAAGTTTGTTTACTTGGACAACAATTATGACAGGATATGTTAGAAGTGGGAGAAGTGATGTTTCATTGATGTTGTTCTATGACATGATGAGGGATGCTTATGTTGTTCCTGATAAGTATGTTCTTTCTAGTGCATTAAGTGCATGCTCAGTGCTACGGTGTCTTGAAGGGGGAAAGCAAATT

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_408346.p1 GENE.S_Transcript_408346~~S_Transcript_408346.p1 ORF type:internal len:88 (+),score=17.91,PPR|PF01535.16|0.00023,PPR|PF01535.16|1e-05,PPR|PF01535.16|2.2e+03,PPR_2|PF13041.2|0.0043,PPR_2|PF13041.2|8.5e-06,PPR_3|PF13812.2|0.0092,PPR_3|PF13812.2|4.4e-05,PPR_3|PF13812.2|1.2e+04,PPR_1|PF12854.3|0.0011,PPR_1|PF12854.3|0.25 S_Transcript_408346:2-262(+)
GTAMIDLYAKVGDVDDARVVFDELSETSLFTWTTIMTGYVRSGRSDVSLMLFYDMMRDAYVVPDKYVLSSALSACSVLRCLEGGKQI

Click here to download the sequence:
Link to NCBI Protein BLAST