Transcript Information: S_Transcript_40840.p1


Annotated TAIR IDAT5G07670.1
Annotated Gene NameRNI-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:2430421-2432065 | Forward length=476
E-Value9.1E-169
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 118.045435445183
Replicate 220.553463913741
Replicate 323.266791799633
Condition 2: 8 Hour
Replicate 120.89630801699
Replicate 223.182096678992
Replicate 320.929846340505
Condition 3: 24 Hour
Replicate 126.284185769367
Replicate 224.670265719927
Replicate 322.329375328473


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_40840.p1 GENE.S_Transcript_40840~~S_Transcript_40840.p1 ORF type:3prime_partial len:497 (+),score=94.59,LRR_4|PF12799.3|9.3e+03,LRR_4|PF12799.3|1.3e+03,LRR_4|PF12799.3|36,LRR_4|PF12799.3|14,LRR_4|PF12799.3|2.8,LRR_4|PF12799.3|5.3,LRR_4|PF12799.3|0.7,LRR_4|PF12799.3|33,LRR_4|PF12799.3|5.6 S_Transcript_40840:139-1626(+)
ATGCCAACAGCAGTAGAACAACAACAACAACAACAGCATCGACCAAACCCTAACCCTAACCCTAGCAATCCGAACCCTAACGGAACGCCAAAGAGGAGAAGAGCGAGCTTATCGGAGCTCTGGTGCAAAGACCAGCAATTCAAACACGCCATTTTCAAAATGCAACAGCTTCAACATTTGGACCAATCACAGCCACATACGCCTAAATCTACTACTTCATCTTTAGGTGATGATGATCCTTTTTTTTCTCTGTTATCTGATGAATCTCTGCTTTTAATCTTGTCGAAAGTTCCAATTTCACAGCATGCTTCTAATTCTTTGGTTTGTAAGCGTTGGTTTTGGGTTCAAGGTAAATTAGTTCGTTCACTTTCTGTATTTGATTTGGGTTTTGTTGATTCTGGAAGGTTGACTAGCCGTTTCCCTAATTTGACTGAGGTTAATTTAGTTCCAGCTTGTTTTCGTAGTGGAGGTAGTTCAGGGATTTTGTTGTCTCATAAGCTTGTTTCGATTCATCTCAATTCGGAATTTGTTAGTGATGATTTGGTTGGGGAGGGAGGTGTTTTAGGGTGTGGTTTGATTGATAGAGGGCTTAAAGTGCTTGCTAATGGATGCCCTAATTTGAGGAAATTAGCGTTGGTCAATGCTAGTGAGGAAGGGTTAGGGTTTGTGGCTGACCATTGTGTGACTCTTCAGGAGTTGGAGATTCATTGTTGTAAGGATATGGCGTTGCGTGGTGTTTCGGGCTTCAAGAACCTGCAGATATTGAAATTGATTGGTTCTGTTGATGGCTTGTATAATTCTGCTGTTACTGATATTGGGTTGACTATTTTAGCTCAAGGGTGTAGGAGGTTGGTCAAGCTCGAGCTTAGTGGGTGTGAGGGTAGCTATGACGGGATTAAGGCGATTGGGCAATGTTGTCAAATGCTTGAAGAGTTGACCATTTCTGCTCACAATATGGATGGTGGCTGGTTGTCAGGACTCTCGTTTTGTGGCAATTTGAAGACCTTGAAGCTTCAGTCGTGTGAGAATATCGATCCTTGTCCTGGTCCGGATGAACATTTGGGTTCGTGTCCTACGCTTGAGGAGCTTTACTTGGAACGATGCCAAGTGCGGGATAAAGGGAGTGTTAGAGCTCTGTGCCTGGTGTGTGAATCTATCCGAGAGATTTCATTTCGTGATTGTTGGGGATTGGAGGATGACATATTCCGTTATGCAACTATTTGTAGGAGGGTGAAGTCATTATCTTTGGAAGGATGCTCCTTGTTGACAATAGAAGGTTTGGACTCAGTAGTTCATACGTGGAAGGAGCTCCAGACGCTTAAAGTGGTATCATGTAACAACATAAAAGACGCAGAAATTACTCCTGAGCTGGCAACCTTGTTTTCTGTCTTGAAAGAGCTGAAATGGAGGCCAGATTCGATATCTCTACTGGCATCAAGTCTTGCTGGCACTGGCGTTGGAAAGAAGGGCGGTAGATTTTTCAAGAGG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_40840.p1 GENE.S_Transcript_40840~~S_Transcript_40840.p1 ORF type:3prime_partial len:497 (+),score=94.59,LRR_4|PF12799.3|9.3e+03,LRR_4|PF12799.3|1.3e+03,LRR_4|PF12799.3|36,LRR_4|PF12799.3|14,LRR_4|PF12799.3|2.8,LRR_4|PF12799.3|5.3,LRR_4|PF12799.3|0.7,LRR_4|PF12799.3|33,LRR_4|PF12799.3|5.6 S_Transcript_40840:139-1626(+)
MPTAVEQQQQQQHRPNPNPNPSNPNPNGTPKRRRASLSELWCKDQQFKHAIFKMQQLQHLDQSQPHTPKSTTSSLGDDDPFFSLLSDESLLLILSKVPISQHASNSLVCKRWFWVQGKLVRSLSVFDLGFVDSGRLTSRFPNLTEVNLVPACFRSGGSSGILLSHKLVSIHLNSEFVSDDLVGEGGVLGCGLIDRGLKVLANGCPNLRKLALVNASEEGLGFVADHCVTLQELEIHCCKDMALRGVSGFKNLQILKLIGSVDGLYNSAVTDIGLTILAQGCRRLVKLELSGCEGSYDGIKAIGQCCQMLEELTISAHNMDGGWLSGLSFCGNLKTLKLQSCENIDPCPGPDEHLGSCPTLEELYLERCQVRDKGSVRALCLVCESIREISFRDCWGLEDDIFRYATICRRVKSLSLEGCSLLTIEGLDSVVHTWKELQTLKVVSCNNIKDAEITPELATLFSVLKELKWRPDSISLLASSLAGTGVGKKGGRFFKR

Click here to download the sequence:
Link to NCBI Protein BLAST