Transcript Information: S_Transcript_408418.p1


Annotated TAIR IDAT3G22400.1
Annotated Gene NamePLAT/LH2 domain-containing lipoxygenase family protein
Annotated Gene Symbol(s)LOX5
Annotation TypeOrtholog
Chromosome Positionchr3:7927011-7931167 | Forward length=886
E-Value6.1E-67
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10
Replicate 20
Replicate 30
Condition 2: 8 Hour
Replicate 10.3182894077184
Replicate 20
Replicate 30
Condition 3: 24 Hour
Replicate 10
Replicate 20.33826584442309
Replicate 30.37644842395696


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_408418.p1 GENE.S_Transcript_408418~~S_Transcript_408418.p1 ORF type:internal len:134 (+),score=14.35,Lipoxygenase|PF00305.15|1.3e-52 S_Transcript_408418:2-400(+)
TTGCTTATCAATTTTCTTGGCATGTATAATCCCCAAAATAATGAACAGGCACTTCATAGTAACAAGCTATATATACTAGACCATCATGATGCATTAATGCCATACCTGGAGCGGATAAATTCCACTGCCACAAAGACTTATGCAACTCGAACAGTCCTCTTTCTGAAATATGACGGGACGCTGAAGCCATTAGCAATAGAGCTGAGCTTGCCTCACCCACAAGGAGATTCTCATGGTGCCGTCAGTCAGGTTTATACTCCTGAAGAAGATGGTACCGTCCAAGGTTCCGTGTGGAAACTCGCCAAAGCCTATGCTGCCGTTGATGATTCTGGTTATCATCAGCTCATAAGTCATTGGTTACACACCCATGCTGTAATTGAACCATTTATAATTGCAACT

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_408418.p1 GENE.S_Transcript_408418~~S_Transcript_408418.p1 ORF type:internal len:134 (+),score=14.35,Lipoxygenase|PF00305.15|1.3e-52 S_Transcript_408418:2-400(+)
LLINFLGMYNPQNNEQALHSNKLYILDHHDALMPYLERINSTATKTYATRTVLFLKYDGTLKPLAIELSLPHPQGDSHGAVSQVYTPEEDGTVQGSVWKLAKAYAAVDDSGYHQLISHWLHTHAVIEPFIIAT

Click here to download the sequence:
Link to NCBI Protein BLAST