Transcript Information: S_Transcript_40860.p1


Annotated TAIR IDAT3G62110.1
Annotated Gene NamePectin lyase-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr3:22997313-22999503 | Reverse length=471
E-Value8.7E-113
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 13.6633281052475
Replicate 25.7166742173318
Replicate 35.5253541303095
Condition 2: 8 Hour
Replicate 11.9857650902593
Replicate 22.9889514376963
Replicate 32.847866279208
Condition 3: 24 Hour
Replicate 113.089241929587
Replicate 29.6344138280019
Replicate 311.130375871084


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_40860.p1 GENE.S_Transcript_40860~~S_Transcript_40860.p1 ORF type:complete len:247 (+),score=27.93,Glyco_hydro_28|PF00295.13|2.1e-16,Pectate_lyase_3|PF12708.3|3.7e-10 S_Transcript_40860:1088-1828(+)
ATGAAGATGAATTTGGTTATAGTGATTGTGAGTGTGATTGTTAGTGAATTTGGCTCTGCTCATAGTAGTGATTGTACTACTCCCGCAAGATCAGCACAATTCCGGAAATACAGTGTTTCCATAACTGAATTTGGAGGTGTTGGAGATGGGCTTACCCTTAATACCAAAGCCTTTCATGATGCTATCCACCATCTTACTCCTTTCTCTCACAAGTATGGGGCTCAGCTTATCATCCCTGCTGGCCGCTGGTTGACTGGAAGCTTTGGCCTTATCAGTCATCTCACTTTGTGGCTCCATAGTGATGCTGTCTTACTCGCATCCAAGAACTCAGATGATTGGCCTATTGTGGATCCTTTACCTTCCTATGGGCGAGGCAGGGAGTTGCCTGGTAGGAGATACCAGAGTCTTATTTATGGACACAACTTGACAGACGTCATTATAACAGGTCACAATGGAACTATTGATGGCCAAGGTCATGTTTGGTGGGACTGGTTTCACAACAACACCCTAAGCTATACTCGGCCTCACTTGCTTGAATTCATCAACTCAACTGAGATAATCATCTCAAATCTGACCTTTTTAAACTCCCCATTCTGGAATATCCACCCTGTATATTGCAGCAAGGTGGTCATCCAGAATCTTACCATTCTTGCACCTTATTATTCCCCCAACACAGACGGCATAGATCCAGGTGAGCATTTTACCCAAGGATTAGTAAGTTTTAAGAGCTTCTCGATATAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_40860.p1 GENE.S_Transcript_40860~~S_Transcript_40860.p1 ORF type:complete len:247 (+),score=27.93,Glyco_hydro_28|PF00295.13|2.1e-16,Pectate_lyase_3|PF12708.3|3.7e-10 S_Transcript_40860:1088-1828(+)
MKMNLVIVIVSVIVSEFGSAHSSDCTTPARSAQFRKYSVSITEFGGVGDGLTLNTKAFHDAIHHLTPFSHKYGAQLIIPAGRWLTGSFGLISHLTLWLHSDAVLLASKNSDDWPIVDPLPSYGRGRELPGRRYQSLIYGHNLTDVIITGHNGTIDGQGHVWWDWFHNNTLSYTRPHLLEFINSTEIIISNLTFLNSPFWNIHPVYCSKVVIQNLTILAPYYSPNTDGIDPGEHFTQGLVSFKSFSI*

Click here to download the sequence:
Link to NCBI Protein BLAST