Transcript Information: S_Transcript_40875.p1


Annotated TAIR IDAT3G09720.1
Annotated Gene NameP-loop containing nucleoside triphosphate hydrolases superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr3:2980483-2983268 | Reverse length=541
E-Value1.2E-259
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 123.578185304853
Replicate 224.307775161613
Replicate 322.616618460415
Condition 2: 8 Hour
Replicate 124.991860933061
Replicate 226.532227509571
Replicate 324.756300200873
Condition 3: 24 Hour
Replicate 123.492830841639
Replicate 224.969953806923
Replicate 323.230830373133


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_40875.p1 GENE.S_Transcript_40875~~S_Transcript_40875.p1 ORF type:complete len:570 (+),score=124.13,DEAD|PF00270.25|3.2e-39,Helicase_C|PF00271.27|6.6e+02,Helicase_C|PF00271.27|3.5e-30,ResIII|PF04851.11|1.4e+03,ResIII|PF04851.11|9.4e-07,ResIII|PF04851.11|6.7e+03 S_Transcript_40875:134-1711(+)
ATGGAGGATACCTCCTTCTTATTTGCAGGCATTAAATTCGACCGAAAGAAGTTCGCCAAAGATTTCGAGAGGTTTAAGGAAAGAAAGGAAATCAAAGTTTTGGAATCGAATCAAACTGTTGCTCAGAGCGCCAAGTCTGAATCTGAAGAAGGGAACAAGTCCATTAAGAAGAGAAAACGGAAGGGAGCAAATGATTTAGTCGACGGATTCAGTGTCTTTAAGAGCTCAAAGCCAGTTACTCAGGCTGAGCTAGACAATGGGACAGAGGAGTCTTCTGAGCAGAAGAAGGATGCTTTTCGTCAGCTTGAGAGGGATGCAATCTTTCGGAAAAAGCATAACATTCATATTTCTGGGAGTAACATTCCATCTCCACTCCAAAGCTTTGAGGAGCTCAGTGTTAGATACAAATGCAAATCATACTTGCTGCGGAATTTTGCTGAACTTGGATACAAGGAGCCCACCCCCATCCAAAGGCAGGCTATTCCAGTCCTTCTATCTGGGCGTGAATGCTTTGCTTGTGCTCCTACTGGCTCCGGGAAAACCTTGGCATTTATTTGCCCCATATTAATGAAATTAAAGCATGGAATGAAGGACGGTGTTCGTGCTGTGGTTCTTTGTCCTACACGTGAGTTAGCTGCTCAAACAACTAGAGAATGCAAGAAACTTGCTAAAGGAAAGAAGTTCTATATTAAATTAATGACTAAAGAGCTTGCAAGAAGTGGTGATTTCTCAAAATTGCCCTGTGATATACTTATCTCGACACCTCTTCGGTTAGAATCTGCAATTTGCAAAAGAAAGCTTGATTTAAGCAGGGTTGAATATCTTGTTCTTGATGAATCCGATAAATTATTCGAGCTTGGTTTTGTGAAGCAGATTGATTTTGTTGTCAAAGCATGCTCAAACCCCTCAATAATACGGTCATTGTTCAGTGCTACTTTACCTGATACTGTTGAAGACCTTGCACGAACATTGATGCATGATGCTGTCCGGGTCATTGTGGGAAGAAAGAATACAGCTTCTGAAACTGTTAAGCAAAAATTGGTGTTTGCTGGAAGTGAAGAAGGGAAGCTTATTGCACTCCGTCAGAATTTTGCTGAGAGTCTGAATCCACCAGTTTTAATTTTTGTGCAAAGTAAGGAACGTGCAAAAGAGCTCTACAGAGAACTGGCATTTAGAGATGTCAGAGTGGATGTCATCCATGCTGATTTGTCCCAAGAACAGAGGGAGAATGCTGTTGATGATTTCAGGGCTGGTAAAACTTGGGTTTTGATAGCTACTGATGTTATTGCTCGTGGTATGGACTTCAAAGGTGTTAATTGTGTGATCAATTATGATTTCCCAGATTCTGCTTCGACTTACATCCATAGAATTGGTCGATCTGGCAGAGCTGGGAGGACAGGAGAAGCCATTACCTTTTATACGGAAGAAGATATACCATACTTGCGTAACATAGCCAATGTGATGTCACAATCTGGCTGTGAGGTTCCTTCTTGGATCATGTCCATGCCCAAAACTAAGTGGAAGAAGCACAGACCACAAAGGGATTCCATATCATGCGGTCCAAATACTGATGAATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_40875.p1 GENE.S_Transcript_40875~~S_Transcript_40875.p1 ORF type:complete len:570 (+),score=124.13,DEAD|PF00270.25|3.2e-39,Helicase_C|PF00271.27|6.6e+02,Helicase_C|PF00271.27|3.5e-30,ResIII|PF04851.11|1.4e+03,ResIII|PF04851.11|9.4e-07,ResIII|PF04851.11|6.7e+03 S_Transcript_40875:134-1711(+)
MEDTSFLFAGIKFDRKKFAKDFERFKERKEIKVLESNQTVAQSAKSESEEGNKSIKKRKRKGANDLVDGFSVFKSSKPVTQAELDNGTEESSEQKKDAFRQLERDAIFRKKHNIHISGSNIPSPLQSFEELSVRYKCKSYLLRNFAELGYKEPTPIQRQAIPVLLSGRECFACAPTGSGKTLAFICPILMKLKHGMKDGVRAVVLCPTRELAAQTTRECKKLAKGKKFYIKLMTKELARSGDFSKLPCDILISTPLRLESAICKRKLDLSRVEYLVLDESDKLFELGFVKQIDFVVKACSNPSIIRSLFSATLPDTVEDLARTLMHDAVRVIVGRKNTASETVKQKLVFAGSEEGKLIALRQNFAESLNPPVLIFVQSKERAKELYRELAFRDVRVDVIHADLSQEQRENAVDDFRAGKTWVLIATDVIARGMDFKGVNCVINYDFPDSASTYIHRIGRSGRAGRTGEAITFYTEEDIPYLRNIANVMSQSGCEVPSWIMSMPKTKWKKHRPQRDSISCGPNTDE*

Click here to download the sequence:
Link to NCBI Protein BLAST