Transcript Information: S_Transcript_408835.p1


Annotated TAIR IDAT3G51690.1
Annotated Gene NamePIF1 helicase
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr3:19176731-19178107 | Reverse length=331
E-Value2E-30
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10
Replicate 20.17510150442472
Replicate 30.14637092129842
Condition 2: 8 Hour
Replicate 10
Replicate 20
Replicate 30.50752018107098
Condition 3: 24 Hour
Replicate 10
Replicate 20
Replicate 30.40034991119232


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_408835.p1 GENE.S_Transcript_408835~~S_Transcript_408835.p1 ORF type:5prime_partial len:126 (+),score=2.57,Herpes_Helicase|PF02689.10|1.8e-07 S_Transcript_408835:2-379(+)
CGATTACGTTTAACCAAGTTGGGTCACAATGTTATAGAAGCAGAGGTTCTTACTGGTAGCAAGATTGGAAACAAGGTATTTATACCTCGATTTTCATTAACGCCATCAGATTCACATCTACCGATCAAGTTTACTAGAAGACAGTTCCCCATTAGGATATGTTTTGCCATGACCATTAATAAAAGTCAAGGACAATCACTTGAACGTGTGGGTGTCTACTTACCTACACCGGTATTCACACATGGTCAATTATATGTTGCGGTTTCTCGAGTGACTAATAGAGAAGGTTTGAAATTTCTTATACTAGATGAAAATGGCAATCCATGTAACAAGACTCTTAATGTAGTGTTCAAAGAAGTCTTTAATAATATTGGTTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_408835.p1 GENE.S_Transcript_408835~~S_Transcript_408835.p1 ORF type:5prime_partial len:126 (+),score=2.57,Herpes_Helicase|PF02689.10|1.8e-07 S_Transcript_408835:2-379(+)
RLRLTKLGHNVIEAEVLTGSKIGNKVFIPRFSLTPSDSHLPIKFTRRQFPIRICFAMTINKSQGQSLERVGVYLPTPVFTHGQLYVAVSRVTNREGLKFLILDENGNPCNKTLNVVFKEVFNNIG*

Click here to download the sequence:
Link to NCBI Protein BLAST