Transcript Information: S_Transcript_40904.p1


Annotated TAIR IDAT4G03510.1
Annotated Gene NameRING membrane-anchor 1
Annotated Gene Symbol(s)RMA1, ATRMA1
Annotation TypeOrtholog
Chromosome Positionchr4:1557905-1558654 | Reverse length=249
E-Value1.3E-54
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 15.7564171950704
Replicate 25.7404750259365
Replicate 35.6079793106873
Condition 2: 8 Hour
Replicate 13.543089927298
Replicate 25.6806261436296
Replicate 35.8802338220638
Condition 3: 24 Hour
Replicate 16.7794466005292
Replicate 24.9022037578933
Replicate 35.2183540148516


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_40904.p1 GENE.S_Transcript_40904~~S_Transcript_40904.p1 ORF type:5prime_partial len:319 (+),score=9.53,zf-C3HC4|PF00097.21|3.5e-08,zf-C3HC4_2|PF13923.2|2.3e-07,zf-C3HC4_2|PF13923.2|4.8e+03,zf-C3HC4_2|PF13923.2|1.3e+04,zf-C3HC4_4|PF15227.2|5.4e-07,zf-C3HC4_4|PF15227.2|9.3e+02,zf-RING_2|PF13639.2|1.1e-06,zf-RING_UBOX|PF13445.2|5.5e-06,zf-RING_UBOX|PF13445.2|37,zf-C3HC4_3|PF13920.2|5.2e-06,zf-C3HC4_3|PF13920.2|9.6e+03 S_Transcript_40904:2-958(+)
AATTCCTCCTCAATAGCAGATTTTCTCTCCCCTTCTTTCTCTCTCTTCTCTCTCTATAACTCCTCTGTTACTCAAGCTTGGATACTAGTAACGTTGCTGAGAGAAGTAACCCTGATAAAGTTCTTTAATCTGCTCTCAATTCTCAAAAGCAACAAAAGTCTTCAAAATACTAACTTGGCAAACATGGAGCAGTCGTTCCGACGTACTATGTCTACACGAAGTGAATCCAGTCGAGAAGATGTGGAGAAATGGAAATCTTCGTCAGCTGGAGCCGCCAGCACGGAAAACAAATCATCGGGTGGGTTTGATTGCAACATCTGCCTGGACTTTGTTCAGGACCCTATCGTAACATTTTGTGGTCACCTCTACTGTTGGCCTTGCATTTATAAGTGGATCAATAATTCTCAGAGGGCTTCTTCCTCTGAGGATTATGACCACCACCAACCTCAATGTCCAGTTTGTAAAGCGGATGTATCGGAGAACACTTTGATTCCCCTCTATGGGCGGGGCCAGCCTAGAAACTCATTCGATGGCAAGAATAATGGTGGGGTCCCACAGAGGCCTCGCTGTGGGGTCCACACACTAATAGCTTGTACGACCTCGAGTTCTCATCATCCTACTCAACAATTCCATCACCGTCAGGATTACCCTGGTCACCGCCAGCAAGTAGTACATCCGTACTACTCATTGGGCGAGTACCCTTCATCATCACCAGCGTTTGGTTTTGCGGGGACCACCACTTTCCATCCGATGATCGGAATGTTTGGTGAAATGATACATGCCCGAATATTCGGGAATTCACAAACTACCCTATACACAACATATCCAAACACGTACAGTGTGGCGACCACCAGTAGCGCGAGAGTTAGACGGCATGTCATGCAGGCAGATAGGTCGCTGAGCAGAGTCAGTTTCTTCCTCTGCTGTTGCATTATTGTGTGCCTCCTATTGTTCTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_40904.p1 GENE.S_Transcript_40904~~S_Transcript_40904.p1 ORF type:5prime_partial len:319 (+),score=9.53,zf-C3HC4|PF00097.21|3.5e-08,zf-C3HC4_2|PF13923.2|2.3e-07,zf-C3HC4_2|PF13923.2|4.8e+03,zf-C3HC4_2|PF13923.2|1.3e+04,zf-C3HC4_4|PF15227.2|5.4e-07,zf-C3HC4_4|PF15227.2|9.3e+02,zf-RING_2|PF13639.2|1.1e-06,zf-RING_UBOX|PF13445.2|5.5e-06,zf-RING_UBOX|PF13445.2|37,zf-C3HC4_3|PF13920.2|5.2e-06,zf-C3HC4_3|PF13920.2|9.6e+03 S_Transcript_40904:2-958(+)
NSSSIADFLSPSFSLFSLYNSSVTQAWILVTLLREVTLIKFFNLLSILKSNKSLQNTNLANMEQSFRRTMSTRSESSREDVEKWKSSSAGAASTENKSSGGFDCNICLDFVQDPIVTFCGHLYCWPCIYKWINNSQRASSSEDYDHHQPQCPVCKADVSENTLIPLYGRGQPRNSFDGKNNGGVPQRPRCGVHTLIACTTSSSHHPTQQFHHRQDYPGHRQQVVHPYYSLGEYPSSSPAFGFAGTTTFHPMIGMFGEMIHARIFGNSQTTLYTTYPNTYSVATTSSARVRRHVMQADRSLSRVSFFLCCCIIVCLLLF*

Click here to download the sequence:
Link to NCBI Protein BLAST