Transcript Information: S_Transcript_409087.p1


Annotated TAIR IDAT3G24255.1
Annotated Gene NameRNA-directed DNA polymerase (reverse transcriptase)-related family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr3:8789471-8793208 | Forward length=746
E-Value8E-25
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.076474141480404
Replicate 20.19019646170271
Replicate 30
Condition 2: 8 Hour
Replicate 10.3063992861657
Replicate 20.12857384275705
Replicate 30.49001948517199
Condition 3: 24 Hour
Replicate 10.25109061483442
Replicate 20.19537768600299
Replicate 30.21743141728548


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_409087.p1 GENE.S_Transcript_409087~~S_Transcript_409087.p1 ORF type:complete len:348 (+),score=46.63,RVT_1|PF00078.23|2e-16 S_Transcript_409087:126-1046(+)
ATGAAAGTCACAAATCTATGCTTTGCTGATGATGTTATCTTATTTTGTAAAGCTGATGAGATTTCTATAAGTATTGTTATGAGGTGCCTGGATAAGTTTGCAAAAGCTTCAGGATTGGAGGTCAATATGAGTAAATCTCAGATATACTTAGGTGGTGTATCTGATGCACTTAAAAGACAGATTTTGGTAAAAACAGGCTTTGTAGAGGGTACTTTTCCCATGAAGTATTTGGGTATGCCTCTTTCACCCAGTAAATGGAATAAAGCTGACTGTCAATTTCTTGTGGATAAAATTGTGAAAAGGGTCAACTCTTGGAGCAGCAGCAATTTATCTCTGGCAGGTAGGGCTCAACTAATTAATTCAGTGCTATACTCCCTGCATACTTATTGGGCTAGTATTTTTGTTATCCCATCTGGTGTAATCAAGCTCATTGAAAGAGCCTGTAGGAAGTTTCTTTGGGGGCAGCATCTTGATAATAATAAAATCCCTTTGTTAGCTTGGAACTTCGTCTGTCAAGCAAAGAGAACTGGTGGCGTAAGCATTAGAAACTGTAGAATATGGAATAGAGCAGCAATTGCAAAGCATTTATGGGCTGTTGCAGAGAAGAAAGACTGCTTGTGGGTTAAATGGGTAAATGGAGTGTATTTGAAAGTGGAAAGCATATATGATTATACCTGTCCAAATGATTGCAGCTGGTATTGGAAGAAACTTGTGAAGCTCACTGAGATTAGTTGTTTTCAAAGGGGACGATGGCCAGTGGATGTTATGGGATCCTACACCATTGCTCAGGGATATAAAGAACTGATTGGAACTCAGCCTAAGTATCAGTTGGCCACTATCATCTGGGGGAAGCTTACAGTGCCTAAGCATGCTATTTCCCTCTGGTTAATCGCTCACAGAAGGTTACTAACTAGAGACTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_409087.p1 GENE.S_Transcript_409087~~S_Transcript_409087.p1 ORF type:complete len:348 (+),score=46.63,RVT_1|PF00078.23|2e-16 S_Transcript_409087:126-1046(+)
MKVTNLCFADDVILFCKADEISISIVMRCLDKFAKASGLEVNMSKSQIYLGGVSDALKRQILVKTGFVEGTFPMKYLGMPLSPSKWNKADCQFLVDKIVKRVNSWSSSNLSLAGRAQLINSVLYSLHTYWASIFVIPSGVIKLIERACRKFLWGQHLDNNKIPLLAWNFVCQAKRTGGVSIRNCRIWNRAAIAKHLWAVAEKKDCLWVKWVNGVYLKVESIYDYTCPNDCSWYWKKLVKLTEISCFQRGRWPVDVMGSYTIAQGYKELIGTQPKYQLATIIWGKLTVPKHAISLWLIAHRRLLTRD*

Click here to download the sequence:
Link to NCBI Protein BLAST