Transcript Information: S_Transcript_40911.p1


Annotated TAIR IDAT5G60410.2
Annotated Gene NameDNA-binding protein with MIZ/SP-RING zinc finger, PHD-finger and SAP domain
Annotated Gene Symbol(s)ATSIZ1, SIZ1
Annotation TypeHomolog
Chromosome Positionchr5:24295226-24300792 | Forward length=885
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 17.6311979445457
Replicate 28.6656257780118
Replicate 39.488010009274
Condition 2: 8 Hour
Replicate 110.971014054718
Replicate 211.051154147335
Replicate 310.991786475822
Condition 3: 24 Hour
Replicate 110.501335557527
Replicate 29.2566652100985
Replicate 39.9368777355096


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_40911.p1 GENE.S_Transcript_40911~~S_Transcript_40911.p1 ORF type:complete len:830 (+),score=183.96,zf-MIZ|PF02891.16|1.2e-18,PHD|PF00628.25|3.7e-05,PHD|PF00628.25|6.3 S_Transcript_40911:203-2692(+)
ATGGAGATGGATTCTGATGTTATCAATGCTTGTAAGAACAAAGTGAAGCAGTTCCGGATCAAAGAGCTTAAGGATGTACTGACTTATGTAGGCCTTTCAAAGCAAGGGAAGAAGCAGGATCTTACGGACAGAGTTTTGGCTTTGCTTTATGATGAAGGCACTCCTGGTGTGTTCAACAATAACGTAAATGGGAAGGAAGAACTTGTTGAATTTATTGATGATGCTTACAGGAAGATGCATGAAATGGGTACAGCCGACTCAAATTCAAAGAAGCAAAATGGCGCAAATTGCAGCAGAAGCCAGTCCAAGGAGGTTGTTGAAGAACCGTACCACTTGGAAAGACAAATTAGATGTCCTTGTGGTAGCAACGTCCCCAATGATGGCGTGCTGATTCAGTGCCTGGACCCAGATTGTAATGTATGGCAACACCGTTGTTGTGTGATTATCCCTGAGAAGCCTATGGAGGCGATTTCTGTGCCATTTCAGTTTCTTTGTGAAATCTGTCGGACGAAACGTGCTGACCCCTGTTGGGCAACTATGGCGCATCCATTGTATCCTGTCAAGTTAAGTTCTTCATCAGTTCCTCTTGATGGTACCAACCCCATTCAAACGGTGGAGAAAACCTTTAAATTAACAAGGGCAGATAGGGATTTGTTGCAGAAGGAGGATTATGATCTACAGGCCTGGTGCATGCTTTTGAATGATAGCGTTCCATTTAGGTTGCAATGGCCGCGATATGCTGATCTTCAGGTTAATGGTATTCCAGTTCGAATTGTAAATAGACCAGGTTCACAGTTGTTAGGAGCTAATGGACGCGATGATGGTGCAAAAATTACATTGTACATTGCAGAAGGAACGAACAAAATTTCCTTATCAGGGTCTGATGCTCGTATTTTCTGTCTTGGAGTCAGACTTGTGAGAAGGCGAACACTTCAACAGGTACTAGGTATGATTCCTAAGGAGCCAGATGGTGAGTCTTTTGAGTATGCCCTTGCTCGAGTCCAGCGATGCATTGGTGGTGGAATGGCAACAGATAATAATGACAGTGATAGTGATTTAGAGGTCATTGCTGATTCAATCACGGTTAATCTTCGCTGTCCTATGAGTGGCTCTAGAATGAAGACTGCTGGAAGATTCAGACCTTGCGCACATATGGGCTGCTTTGATCTTGGAACTTTTGTGGAACTCAATGAACGCTCCAAGAAGTGGCAATGCCCCATCTGTCTCAAGAACTACTCTCTCGAAGATCTTATTATTGACCCGTTTTTCAATCGTATTCTAAACATGATGCAAAATTGTGAAGAGGAGATAAATGAGATTGACATGAAGTCTGATGGTACTTGGCGAGCCAAAAAAGCTCGTGAAGTTGGGGATCTTGCACAGTGGCACCGCCCTGATGGTTCTGTTGAAGCCCTACTCTTCTCAGAAATTAGGCAAGGAGATGTATTGGAATGCAAGAATTCACAACTAGGTATAGAGAATAACAGTGGTGGTTGCCATGCTGATGGCCATCAGGGTGTAGGCCACTCATTCATGAATCAAGAGGGCAATGAAGTTGAATATTGTGACCAGAAGAATATCATAACCATGAGCAGCACTTCCACAGGATGTGATAATGATGATGGGGACCCAAGTATTAACCAAGATGGTGGTGATGAGTTTGGTAATTCTAATAGCAATGAGAATGAAGTCAGTTCAGGTGGTCGAGGCGCTAGTCTTTCGGCGGCACATGCTGATGTTATTGTTCTTAGTGATTCAGAAGATGATGATGTTTGTCTAGTTTGTCCGGAAACTGTTTCGGTAGATGGAAATTCACTTTCTGCTCCTGCAAAAATTATTGACTCTTATCCTGCGCTTGTTTCTGGTGATCGCTCGTGTCTTTTCAATGGGAATGCTGATGCCTTTTTGAAGTCTCAGCCGTCTGTTCCTTCTAATCCGCAAGGAGATCCTGGAATGGATTTCTTTGGTACTGGCGTCATGGTTGATGAGCATAATTCAGCCTCCTGTTCTCAATCTGTAAATCAGTTGTTGACCTCAGAGTCCTCTATGGATCGTGTTCTTAATGTTATGGATTCACATGATCCAACTAATAGCTCGTTTGTCCATCCGTTGGCATCTGTTAGTGGTGACATCTCGTTAGAAGTTCTCCTTCCCTCTCCATCTGTTCCCAACCATGAACTTTCAATTTTGAGCAGTATTCCTGGTGAGGACTGGATTTCTCTGAAAACAGGCGGAAATGGAAATTTGGCTGACAGTAGCAATGTTGCAGTTCATCACGAGTCTGCGAATGAAAATGTGATGGATTTGCCAAACCAACCTACATCTAAAGAAGATACTGTGCTCCAGGAAACTTCAGGTGAATCTGGTTCTGGATCTGATCCCACAGTGAATAGGCCAAGATCTGATGGTCCATTCTCTTTTCCTCGCCACCGAAGGACTATGAGAAAACGTGCACATGAAGCAGCGTTTCGAGACCTTGTATCAAAATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_40911.p1 GENE.S_Transcript_40911~~S_Transcript_40911.p1 ORF type:complete len:830 (+),score=183.96,zf-MIZ|PF02891.16|1.2e-18,PHD|PF00628.25|3.7e-05,PHD|PF00628.25|6.3 S_Transcript_40911:203-2692(+)
MEMDSDVINACKNKVKQFRIKELKDVLTYVGLSKQGKKQDLTDRVLALLYDEGTPGVFNNNVNGKEELVEFIDDAYRKMHEMGTADSNSKKQNGANCSRSQSKEVVEEPYHLERQIRCPCGSNVPNDGVLIQCLDPDCNVWQHRCCVIIPEKPMEAISVPFQFLCEICRTKRADPCWATMAHPLYPVKLSSSSVPLDGTNPIQTVEKTFKLTRADRDLLQKEDYDLQAWCMLLNDSVPFRLQWPRYADLQVNGIPVRIVNRPGSQLLGANGRDDGAKITLYIAEGTNKISLSGSDARIFCLGVRLVRRRTLQQVLGMIPKEPDGESFEYALARVQRCIGGGMATDNNDSDSDLEVIADSITVNLRCPMSGSRMKTAGRFRPCAHMGCFDLGTFVELNERSKKWQCPICLKNYSLEDLIIDPFFNRILNMMQNCEEEINEIDMKSDGTWRAKKAREVGDLAQWHRPDGSVEALLFSEIRQGDVLECKNSQLGIENNSGGCHADGHQGVGHSFMNQEGNEVEYCDQKNIITMSSTSTGCDNDDGDPSINQDGGDEFGNSNSNENEVSSGGRGASLSAAHADVIVLSDSEDDDVCLVCPETVSVDGNSLSAPAKIIDSYPALVSGDRSCLFNGNADAFLKSQPSVPSNPQGDPGMDFFGTGVMVDEHNSASCSQSVNQLLTSESSMDRVLNVMDSHDPTNSSFVHPLASVSGDISLEVLLPSPSVPNHELSILSSIPGEDWISLKTGGNGNLADSSNVAVHHESANENVMDLPNQPTSKEDTVLQETSGESGSGSDPTVNRPRSDGPFSFPRHRRTMRKRAHEAAFRDLVSK*

Click here to download the sequence:
Link to NCBI Protein BLAST