Transcript Information: S_Transcript_409382.p1


Annotated TAIR IDAT1G49920.1
Annotated Gene NameMuDR family transposase
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:18481798-18484233 | Reverse length=785
E-Value0.0002
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.58170494503127
Replicate 20.24112338314224
Replicate 30.20155995719782
Condition 2: 8 Hour
Replicate 10
Replicate 20.3667516170447
Replicate 30.23296008311455
Condition 3: 24 Hour
Replicate 10
Replicate 20.12384596489807
Replicate 30.27565075852586


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_409382.p1 GENE.S_Transcript_409382~~S_Transcript_409382.p1 ORF type:5prime_partial len:183 (+),score=38.58 S_Transcript_409382:2-550(+)
GGGAGCCCTTGCAAGCATGCTGTAAGGGCATTAATTCACAGTCAAAAGGATGTTGAATCCTATGTTAGTGATTGGTACTCTGTGAAGAAGTATAGAGAGACCTATGGATTGAATATTCCAACTGTGCTAGATGATGACATGTGGCCTGCTTATAATGTCCCCACAATTCAGGCCCCAGAAATGAAGAGGAGTATTGGGAGACCAACAAGGAATAGAAAAGGAGAACAAGGAGAAAAAAGGAAGGGGAGGAGAACTACAACTGGCCAATGTTCCAAGTGTAAGGCTTTTGGCCACAATAAAAAGACCTGCAGAGGAGGATTAACTACCAGGGAAATGAGAGAAAGTGAAGGTCCTAGAGTTGAACAACATCAACCACAAAAAAGAAGAAAAACCCTCAAGTCAGCATCTAACCAAGAGAACCCAATTTCAAGCAGCCAACCTGTACCACAGACCACAAATCAGACCATGGACTTGGTCTTTTCATCACAGCCTGCACCAACTACTCCCACAGGTCCTACTTTGAGGAAGAGGAAGAACTTACTTAGCTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_409382.p1 GENE.S_Transcript_409382~~S_Transcript_409382.p1 ORF type:5prime_partial len:183 (+),score=38.58 S_Transcript_409382:2-550(+)
GSPCKHAVRALIHSQKDVESYVSDWYSVKKYRETYGLNIPTVLDDDMWPAYNVPTIQAPEMKRSIGRPTRNRKGEQGEKRKGRRTTTGQCSKCKAFGHNKKTCRGGLTTREMRESEGPRVEQHQPQKRRKTLKSASNQENPISSSQPVPQTTNQTMDLVFSSQPAPTTPTGPTLRKRKNLLS*

Click here to download the sequence:
Link to NCBI Protein BLAST