Transcript Information: S_Transcript_409407.p1


Annotated TAIR IDAT5G39120.1
Annotated Gene NameRmlC-like cupins superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:15662705-15663486 | Reverse length=221
E-Value3E-69
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.70342734542327
Replicate 20.38877162215885
Replicate 30.73120980067139
Condition 2: 8 Hour
Replicate 11.3152223103078
Replicate 21.6754247879972
Replicate 31.2207313606377
Condition 3: 24 Hour
Replicate 10.19246593383783
Replicate 20
Replicate 30.22222065555168


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_409407.p1 GENE.S_Transcript_409407~~S_Transcript_409407.p1 ORF type:complete len:227 (+),score=33.79,Cupin_1|PF00190.18|1.4e-47,Cupin_2|PF07883.7|5e-08 S_Transcript_409407:74-754(+)
ATGGCAACTCGTAACGTTTTCGCCTACGTGCTCATTGTGGCCACCACTTTTTATGTGGCCTATGCCACAGATCCTACCCAGTTGCAAGATTTCTGTGTTGGTGTTAATGACCCTCTTGATGGAGTGTTTGTGAACGGGCTATTCTGCAAGGATCCAATGAAAGCGAAGCCAGAGGATTTCATGTTCAGTGGGCTAGACAAACCAGGTAACACAAACAACAAGCTAGGTTCTAGTGTCACACCAGTCACAGCAGCAAACTTGCCAGGACTCAACACGCTTGGGATATCCGTAGCCAGGCTTGACTTTGCACCATATGGCCTTATAGCTCCCCACTTCCACGCCCGTGGCACTGAGATCTTCACCGTCTTAGAGGGCACTATCTATGTGGGTTTTGTGACCTCCAACCAACCAGATGGTAAAAACAAGTTCTTTCCCAAACTCTTGAAGAAGGGAGATGTGTTTGTTTTCCCACAAGGACTCATTCACTTCCAGTTCAATGTGGGTAAAACACCAGCTGTTGCGCTTTCTGGGTTGAGTAGCCAAAACCCTGGTGTTACGACTGTTGCCAATGCGGTGTTTGGTGCTGACCCATCTATCTCTGTTGATGTTCTGTCGAAGGCCTTCCAATTGGATGACAAAGTGGTGAAGCAACTCCAATACCGATTCAAACAGAACAACTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_409407.p1 GENE.S_Transcript_409407~~S_Transcript_409407.p1 ORF type:complete len:227 (+),score=33.79,Cupin_1|PF00190.18|1.4e-47,Cupin_2|PF07883.7|5e-08 S_Transcript_409407:74-754(+)
MATRNVFAYVLIVATTFYVAYATDPTQLQDFCVGVNDPLDGVFVNGLFCKDPMKAKPEDFMFSGLDKPGNTNNKLGSSVTPVTAANLPGLNTLGISVARLDFAPYGLIAPHFHARGTEIFTVLEGTIYVGFVTSNQPDGKNKFFPKLLKKGDVFVFPQGLIHFQFNVGKTPAVALSGLSSQNPGVTTVANAVFGADPSISVDVLSKAFQLDDKVVKQLQYRFKQNN*

Click here to download the sequence:
Link to NCBI Protein BLAST