Transcript Information: S_Transcript_409490.p1


Annotated TAIR IDAT1G71300.1
Annotated Gene NameVps52 / Sac2 family
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:26874064-26878319 | Forward length=721
E-Value4E-06
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.47523216491394
Replicate 20.39397838495562
Replicate 30.32933457292144
Condition 2: 8 Hour
Replicate 10.76162108275475
Replicate 20.59924594570696
Replicate 30.19032006790162
Condition 3: 24 Hour
Replicate 10.39008720518918
Replicate 20
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_409490.p1 GENE.S_Transcript_409490~~S_Transcript_409490.p1 ORF type:5prime_partial len:112 (+),score=11.14,Vps52|PF04129.8|1.1e-05 S_Transcript_409490:1-336(+)
ATTACCTTTCTCAAAGAGCATGGGAGGGAGATTTATACCGAGGTCCAGGCTGCATATATTGATACAATGAATAAAGTAAGTCAGTTTAGCCTACAGGATGGAAACGTTATTGCATTCTTGTTATTAGTTTTGGGTTTGGTCAAGGTTGTTTACTTGAAATTGAAATGCTATGATTGGGATATTTTGTCAACCTGCACTAAATCTGTGTTTTTCAATATTAAAGTAACTTATACATCCTCAGACAAAATGGTTGAAAACTTGAACATATTTAACATGACTTTAGATGAAATGCCAAGATCTGTTTTGACAACTATATTTAGTGTTATGGAAAGATAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_409490.p1 GENE.S_Transcript_409490~~S_Transcript_409490.p1 ORF type:5prime_partial len:112 (+),score=11.14,Vps52|PF04129.8|1.1e-05 S_Transcript_409490:1-336(+)
ITFLKEHGREIYTEVQAAYIDTMNKVSQFSLQDGNVIAFLLLVLGLVKVVYLKLKCYDWDILSTCTKSVFFNIKVTYTSSDKMVENLNIFNMTLDEMPRSVLTTIFSVMER*

Click here to download the sequence:
Link to NCBI Protein BLAST