Transcript Information: S_Transcript_40962.p1


Annotated TAIR IDAT4G32600.1
Annotated Gene NameRING/U-box superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr4:15724010-15725737 | Forward length=453
E-Value9E-113
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 118.516121142401
Replicate 219.825289673144
Replicate 317.877274835754
Condition 2: 8 Hour
Replicate 119.866814092612
Replicate 221.422100348418
Replicate 320.612022448213
Condition 3: 24 Hour
Replicate 117.311039747263
Replicate 216.677144367501
Replicate 318.678589488694


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_40962.p1 GENE.S_Transcript_40962~~S_Transcript_40962.p1 ORF type:complete len:424 (+),score=68.43,zf-RING_2|PF13639.2|1.6e+04,zf-RING_2|PF13639.2|4.7e-14,zf-RING_11|PF17123.1|3.6e-08,zf-rbx1|PF12678.3|1.3e-06,zf-C3HC4|PF00097.21|1.2e+04,zf-C3HC4|PF00097.21|6.7e-06,zf-C3HC4_2|PF13923.2|3.5e+02,zf-C3HC4_2|PF13923.2|9.6e-06 S_Transcript_40962:217-1488(+)
ATGGCTGTTTCATCTGAAGAGCCTGTACGTGAGACCCTAAATGACCAGTACCCGCTACTAAGGGAGCGCTGTAACAGCCATGTGAATGACGAACACATAATTGACATTGAAAGACGTGATGATGCTTCCTCTTCAAATTCATCTGACTTTGAGTTTTCTCATGGTACAAGTCCTAATCGTGACGGTAGAACAACAAGTAGCACGCAGGCCCCTCCTAGCGGGGCGTCTTCGTCTTCTCCTACACGCATAAATTCCAGGAGCTCCTCATTTATAAGGAGAAGCGAGAGCATTGGTCGTCGTAATTGGAGCCCTTTCAATTCAGGGTTTTGGATATCCATAGAGTTAGTATTCACTCTCAGCCAGATCATAGCTTCTGTGACTGTCTTGTGTTTGTCAAGAAACGAACATCCACGAGCTCCCTTGTTTGCTTGGGTTGTTGGTTATACTGCTGGGTGTTTTGCAAGTCTTCCTGTCCTTTACTGGCGCTTCCTCCACCGCAACCAGGTTGCTGAGCGGGGTGCTGTTCAAGCTAGTCAAGCATCACCTCGTGCAAACTCTACATCGGGGCAAAATTCGTATGTCACTATATCTTTAAGTCAGTCATCAGAACAGGAAGATCACCATAATGGATCTGGAGCTACTTATGAACAGACAATGGGGGTTGCAAATAACAGAATTGGCTTAATTATGGACCACTTCAAGATGGCCTTGGATTGCTTCTTTGCTGTCTGGTTTGTTGTGGGTAATGTGTGGATCTTTGGGGGCCATGCATCTGCTGAGGCTCCTAATTTGTATAGGTTATGCATTGTGTATCTTACATTGAGCTGCATTGGATATGCTATGCCTTTCATTTTGTGTGCAATGATATGCTGCTGCTTGCCTTGCATAATCTCTGTTCTTGGAATCCGTGAGGATCTAAGCCAAGTTCGAGGAGCTAGTGAAGAAGCCATAAATGATCTGCCAACATATAAATTCAAGGTGAAGAAAGAAGACGGAAATAATACGGGAGACCCCGAAGAAGGAGGTGGAATTGTAGCAGTGGGAACAGAGAAGGAGCGTATCATCTCTGGGGAAGATGCGGTTTGCTGTATTTGCTTGGCAAGATATATGGATGATGACGAGTTGAGGGAGCTACCGTGTTCTCATTTCTTCCACGCAGAATGTGTTGATAAATGGTTAAAGATCAATGCTACTTGTCCTCTCTGCAAATATGAGATTGTCGAAAGAGGCGAGGCCTCCCCATCACAACCAAACACCACAGAGGAAACCTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_40962.p1 GENE.S_Transcript_40962~~S_Transcript_40962.p1 ORF type:complete len:424 (+),score=68.43,zf-RING_2|PF13639.2|1.6e+04,zf-RING_2|PF13639.2|4.7e-14,zf-RING_11|PF17123.1|3.6e-08,zf-rbx1|PF12678.3|1.3e-06,zf-C3HC4|PF00097.21|1.2e+04,zf-C3HC4|PF00097.21|6.7e-06,zf-C3HC4_2|PF13923.2|3.5e+02,zf-C3HC4_2|PF13923.2|9.6e-06 S_Transcript_40962:217-1488(+)
MAVSSEEPVRETLNDQYPLLRERCNSHVNDEHIIDIERRDDASSSNSSDFEFSHGTSPNRDGRTTSSTQAPPSGASSSSPTRINSRSSSFIRRSESIGRRNWSPFNSGFWISIELVFTLSQIIASVTVLCLSRNEHPRAPLFAWVVGYTAGCFASLPVLYWRFLHRNQVAERGAVQASQASPRANSTSGQNSYVTISLSQSSEQEDHHNGSGATYEQTMGVANNRIGLIMDHFKMALDCFFAVWFVVGNVWIFGGHASAEAPNLYRLCIVYLTLSCIGYAMPFILCAMICCCLPCIISVLGIREDLSQVRGASEEAINDLPTYKFKVKKEDGNNTGDPEEGGGIVAVGTEKERIISGEDAVCCICLARYMDDDELRELPCSHFFHAECVDKWLKINATCPLCKYEIVERGEASPSQPNTTEET*

Click here to download the sequence:
Link to NCBI Protein BLAST