Transcript Information: S_Transcript_40967.p1


Annotated TAIR IDAT1G80400.1
Annotated Gene NameRING/U-box superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:30225864-30227360 | Forward length=407
E-Value1E-103
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 19.1855748944122
Replicate 28.3452631896037
Replicate 39.025168721762
Condition 2: 8 Hour
Replicate 112.452414676907
Replicate 29.1497158739307
Replicate 312.043705857188
Condition 3: 24 Hour
Replicate 17.9529835875922
Replicate 29.9656476435003
Replicate 37.9899620574127


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_40967.p1 GENE.S_Transcript_40967~~S_Transcript_40967.p1 ORF type:complete len:423 (+),score=53.27,zf-RING_2|PF13639.2|1.1e+03,zf-RING_2|PF13639.2|1.3e-12,zf-RING_11|PF17123.1|4.5e+03,zf-RING_11|PF17123.1|4.1e-09,zf-C3HC4|PF00097.21|1.6e+03,zf-C3HC4|PF00097.21|1.2e-06,zf-rbx1|PF12678.3|1.8e-05 S_Transcript_40967:431-1699(+)
ATGGAGCGGCTGGCTGATCTTAACGGCCATCAGCATGTCATTGACATTGCTGTGACCAATGATGCTCCATCAGGTTCATCAAATAGCAATGGTGTACATCAGACTGAGTCATATCATAATGTAGATAGATCATTAAGCAGTATTACAGAAGTTCACCTTCCGCAAGTTTCACTTTCTTCCCCAAATAGAGTAAACTCCAGAAACTCTTCGTTTGTGGGCAGAGGTGAAGCATACACCAGCCCTTTGAATTCTGGCTTGTGGATATCAGTTGAGCTAATTGTCACCTTGGCTCAAATTGTTGCTTCTGTTGTTATTTTGTCACTTTCAAGATATAAGAGTAGTGAAGCTCCATTATTTGCATGGGTTGTGGGTTATGCATGTGGATGTCTAGCAACACTTCCAATTCTGTACAGGCGTCTTCGGAATTGTATCCAGGGTCCTGAACGACATTCATTTCAATCACACCAGAGCTCTTCAGGGGCCATGACTTCGTTCGAAACTAATGCTTCCTCATCAATATCCAACATTCAAGGAGGAGAGAGCAGCCATCAAAATTCACCTGTAATTGCCAGAAACAATTGGACGAGAGGACCAATTAGTGTAAGATTCAGTGGAATCGTGGACCACTTTAAGATGGCCTTGGACTGTTTCTTTGCAGTGTGGTTTGTTGTGGGTAATGTATGGATTTTTGGGGCGCACTCCTCCCCATCTGTTGCTCCAAAGTTGTACAGGTTATGTATAGTTTTCCTTACTTTCAGCTGTATTGGGTATGCCTTACCGTTCCTACTGTGCGCTACAATATTTTGCTGCTTGCCTTGTATTATCTCAGTGCTGGGCATTAGAGAGGAGATCTCAAAAACGAGAGGAGCAACTACTGAATCCATCAATGCTTTACCTACCTACAAGTGTAAGCTATCCAAAAATGAGAGTGCTGATGATGAACAAATCTGCTTGAGCGCTAGTAAAAGTGGAGTCTCAGGTCCTGGGGCTCAGGAGCGCATCATATCCCCAGAAGATGCGGTATGTTGTATTTGCTTGGCAGCCTATCTTGACAATGACGAGCTAAGGGAGCTGCCTTGCTCCCATCTCTTCCACAGTGATTGTGTTGACAAATGGTTGAAGATGAACGCGTTATGTCCTCTGTGCAAACTGGAGGTTGGTAGCTGTGAAGGCAGTAGGGTCCCATCTTTGTCGTCGAGCATTAGACGACGAGATGATAATATCAATGATGAAATTGAGGGCAGTTTTACTCGGAGCAGTATTTTGTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_40967.p1 GENE.S_Transcript_40967~~S_Transcript_40967.p1 ORF type:complete len:423 (+),score=53.27,zf-RING_2|PF13639.2|1.1e+03,zf-RING_2|PF13639.2|1.3e-12,zf-RING_11|PF17123.1|4.5e+03,zf-RING_11|PF17123.1|4.1e-09,zf-C3HC4|PF00097.21|1.6e+03,zf-C3HC4|PF00097.21|1.2e-06,zf-rbx1|PF12678.3|1.8e-05 S_Transcript_40967:431-1699(+)
MERLADLNGHQHVIDIAVTNDAPSGSSNSNGVHQTESYHNVDRSLSSITEVHLPQVSLSSPNRVNSRNSSFVGRGEAYTSPLNSGLWISVELIVTLAQIVASVVILSLSRYKSSEAPLFAWVVGYACGCLATLPILYRRLRNCIQGPERHSFQSHQSSSGAMTSFETNASSSISNIQGGESSHQNSPVIARNNWTRGPISVRFSGIVDHFKMALDCFFAVWFVVGNVWIFGAHSSPSVAPKLYRLCIVFLTFSCIGYALPFLLCATIFCCLPCIISVLGIREEISKTRGATTESINALPTYKCKLSKNESADDEQICLSASKSGVSGPGAQERIISPEDAVCCICLAAYLDNDELRELPCSHLFHSDCVDKWLKMNALCPLCKLEVGSCEGSRVPSLSSSIRRRDDNINDEIEGSFTRSSIL*

Click here to download the sequence:
Link to NCBI Protein BLAST