Transcript Information: S_Transcript_40968.p2


Annotated TAIR IDAT4G32600.1
Annotated Gene NameRING/U-box superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr4:15724010-15725737 | Forward length=453
E-Value1.8E-68
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 13.818906006842
Replicate 20.98936276042667
Replicate 31.6540570478565
Condition 2: 8 Hour
Replicate 14.11207077864
Replicate 23.5112766923338
Replicate 32.1984954928905
Condition 3: 24 Hour
Replicate 12.9387735637571
Replicate 20
Replicate 32.4882734390697


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_40968.p2 GENE.S_Transcript_40968~~S_Transcript_40968.p2 ORF type:complete len:223 (+),score=17.32,zf-RING_2|PF13639.2|1.6e+04,zf-RING_2|PF13639.2|1.6e+04,zf-RING_2|PF13639.2|5e-13,zf-RING_11|PF17123.1|2e+03,zf-RING_11|PF17123.1|1.8e-09,zf-RING_11|PF17123.1|3.9e+03,zf-C3HC4|PF00097.21|6.2e+02,zf-C3HC4|PF00097.21|1.1e+04,zf-C3HC4|PF00097.21|4.8e-07,zf-rbx1|PF12678.3|2.2e-05 S_Transcript_40968:1107-1775(+)
ATGTATGGATTTTTGGGGCGCACTCCTCCCCATCTGTTGCTCCAAAGTTGTACAGGTATGGTATACATATTCTGTCTTCTTCCAGCTCTTATATCCATTCGGATAACTAACCATTTTGCACTTGAACACAGGTTATGTATAGTTTTCCTTACTTTCAGCTGTATTGGGTATGCCTTACCGTTCCTACTGTGCGCTACAATATTTTGCTGCTTGCCTTGTATTATCTCAGTGCTGGGCATTAGAGAGGAGATCTCAAAAACGAGAGGAGCAACTACTGAATCCATCAATGCTTTACCTACCTACAAGTGTAAGCTATCCAAAAATGAGAGTGCTGATGATGAACAAATCTGCTTGAGCGCTAGTAAAAGTGGAGTCTCAGGTCCTGGGGCTCAGGAGCGCATCATATCCCCAGAAGATGCGGTATGTTGTATTTGCTTGGCAGCCTATCTTGACAATGACGAGCTAAGGGAGCTGCCTTGCTCCCATCTCTTCCACAGTGATTGTGTTGACAAATGGTTGAAGATGAACGCGTTATGTCCTCTGTGCAAACTGGAGGTTGGTAGCTGTGAAGGCAGTAGGGTCCCATCTTTGTCGTCGAGCATTAGACGACGAGATGATAATATCAATGATGAAATTGAGGGCAGTTTTACTCGGAGCAGTATTTTGTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_40968.p2 GENE.S_Transcript_40968~~S_Transcript_40968.p2 ORF type:complete len:223 (+),score=17.32,zf-RING_2|PF13639.2|1.6e+04,zf-RING_2|PF13639.2|1.6e+04,zf-RING_2|PF13639.2|5e-13,zf-RING_11|PF17123.1|2e+03,zf-RING_11|PF17123.1|1.8e-09,zf-RING_11|PF17123.1|3.9e+03,zf-C3HC4|PF00097.21|6.2e+02,zf-C3HC4|PF00097.21|1.1e+04,zf-C3HC4|PF00097.21|4.8e-07,zf-rbx1|PF12678.3|2.2e-05 S_Transcript_40968:1107-1775(+)
MYGFLGRTPPHLLLQSCTGMVYIFCLLPALISIRITNHFALEHRLCIVFLTFSCIGYALPFLLCATIFCCLPCIISVLGIREEISKTRGATTESINALPTYKCKLSKNESADDEQICLSASKSGVSGPGAQERIISPEDAVCCICLAAYLDNDELRELPCSHLFHSDCVDKWLKMNALCPLCKLEVGSCEGSRVPSLSSSIRRRDDNINDEIEGSFTRSSIL*

Click here to download the sequence:
Link to NCBI Protein BLAST