Transcript Information: S_Transcript_41005.p1


Annotated TAIR IDAT3G07610.3
Annotated Gene NameTranscription factor jumonji (jmjC) domain-containing protein
Annotated Gene Symbol(s)IBM1
Annotation TypeHomolog
Chromosome Positionchr3:2426148-2432876 | Forward length=1049
E-Value2E-08
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10
Replicate 21.2006960303409
Replicate 30.37638236905307
Condition 2: 8 Hour
Replicate 10
Replicate 20.45656833958626
Replicate 30.72502883010141
Condition 3: 24 Hour
Replicate 11.3374418463629
Replicate 21.233404711638
Replicate 30.34315706673627


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_41005.p1 GENE.S_Transcript_41005~~S_Transcript_41005.p1 ORF type:internal len:147 (+),score=37.35,zf-4CXXC_R1|PF10497.5|1.6e+03,zf-4CXXC_R1|PF10497.5|7.5e-06 S_Transcript_41005:1-438(+)
AAGCGAAAGGGGCCAAAGAAGGGGCGGGGTGGGAAAACTGTAGCAAAGGAAGATGGGAGAAGAAAAAAGAAATATGATGTTGAGAAGGTTACAACAACTGCTGTGGAAAATGGCAAAGAGAAGAAACATGTTGAAGGGTGTGTTTCTGAAGGGCTTAGGAGGTCTGGCAGGAGTAGTGTCAGTAAAGTTTGTTATGAGGAGAAAAAACCCAAGACAAGGATTAATATACTTGATGAAAATGGGATCAAGATTGATTCAACTATGTGCCATCAGTGTCAAAGGAATGATAAGGGAGATGTGGTTAGGTGCACCAAATGTAAGACCAAACGTTTTTGTAAGCCCTGCATCCAAAACTGGTATCCCCGGATGACAGATGAACAGATTGCTCAAGCCTGCCCAGTCTGCCTTATGAACTGCAACTGCAAGGCATGCTTGCGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_41005.p1 GENE.S_Transcript_41005~~S_Transcript_41005.p1 ORF type:internal len:147 (+),score=37.35,zf-4CXXC_R1|PF10497.5|1.6e+03,zf-4CXXC_R1|PF10497.5|7.5e-06 S_Transcript_41005:1-438(+)
KRKGPKKGRGGKTVAKEDGRRKKKYDVEKVTTTAVENGKEKKHVEGCVSEGLRRSGRSSVSKVCYEEKKPKTRINILDENGIKIDSTMCHQCQRNDKGDVVRCTKCKTKRFCKPCIQNWYPRMTDEQIAQACPVCLMNCNCKACLR

Click here to download the sequence:
Link to NCBI Protein BLAST