Transcript Information: S_Transcript_41007.p1


Annotated TAIR IDAT3G07610.3
Annotated Gene NameTranscription factor jumonji (jmjC) domain-containing protein
Annotated Gene Symbol(s)IBM1
Annotation TypeOrtholog
Chromosome Positionchr3:2426148-2432876 | Forward length=1049
E-Value4.9E-161
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10
Replicate 20
Replicate 30.074415881978213
Condition 2: 8 Hour
Replicate 10
Replicate 20.13540459835746
Replicate 30.07167400001675
Condition 3: 24 Hour
Replicate 10
Replicate 20
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_41007.p1 GENE.S_Transcript_41007~~S_Transcript_41007.p1 ORF type:complete len:1487 (+),score=497.95,JmjC|PF02373.18|4e-15,WRC|PF08879.6|7.3e-11,zf-4CXXC_R1|PF10497.5|1.6e+03,zf-4CXXC_R1|PF10497.5|7.1e-06,zf-4CXXC_R1|PF10497.5|1.6e+03,zf-4CXXC_R1|PF10497.5|9.7e+03 S_Transcript_41007:313-4773(+)
ATGGAGGAACATAGAAAGAAGAAGAATAATGATAGTAGTAATGGAAAAGTATCAGAAGATGGTTCATCGAAGAAGAAGCCCTCGAAAGGGGATGAAGTGAAAGTTCCACCAGATCATGAGAGGTGTGAGAGAAACGATGGAAAGGTTTGGAGGTGTAAAAAACCTAAAGTGGAAGGTGAGAAGATGTGCCTTCATCATTTGAAGAAGAAACCAGACGAACGTAAAATTGAGGAGACGAAGGAGAAGATTGTTTATACACGCCGGAAATGTAATCATAAGGTGGTGGAAATTGGGGAGGAGAAAATTGAGACGAGAAACCCTAAAATTGAAGAAGGGGAAAAGGAGGCGAGAAACCCTAGAAAAAGGGGGCGTAAGGCTGGGAAGAAGAAAATTGAGGGTGATGTTGATGAGAGTGAGAGTAAAAGGAGCTGTAAGACTGAGGGGAAGCAAGTTGAAGAAGAAAAGGAGAGTCTTTTAAGGGTAAAAGAAGAAGAAATGGTGGTTGAAGATGTTCAGGGTGAGAAACAAGTTGAAGGAAACAAGGAGGATAATTCAAAAGCGAACGAGGATGAAATGAGTGTTGATGGTGAGAAACAAGTTGAAGAAAAGGAGGGTCATTCAAAAGCGAATGAGGATGAAATGAGTGTTGATGGTGCTGAGGGTGACAAAAAAGTTGAAGAAAACAAAGAGGATCATTCAAAAGTGAATGAGGAAGAAATGAGAGTTGAGGGTGAGAAACAAGTTGAAGAAGAAAAGGAAGAGGGACTTGCTAGGGTAAAAGAGGAAGAAATGGGTGTTGAAGGTGAGAAAGAAGTTGAAGAAGATAAGGAGGTCCATTCTAAGGAGAAAGAGGAAGAAAAGGATAATGAAGGTGTTGAGGGTGAAAAAGAAGTTGAAAAAGAAAAGGAGGGTCATTCAAAGGTGAACGAGGAAGAAATGGGTGTTGCAGGTGAGAAACAAGTTGTAGAAGAAAAAGAGAGTTGTTTAAGAGTCAAAGTGGAAGAAATGGGTAATGAAGGTGTTGAGGATGAGAAACAAGTTGGAGAAGAGGAAGAAAGAGAGGAAAGTGTGTGGAAGGCGAAAGAAGAAGTGGGTCTTGAGGGTGATAAACAAGTTGAAGAAGAGAAGGGAAGAGAGGAAATTGTTTTGAAGGCGAAAGAAGTGAGTGTCGAGGGTGAGAAACAAGTTGAGACAGAGAAGAGGAAGCGGAGGAGTTGTTCACAGAAGGCAAAAGAAGTGGGTATTGATGATGATATAGAAGATGAAGATAAAGATGACGAGAGGAAGTCAACTAAGAAGCGAAGGGGGCGAGGGTGTAAAAGGGGTGGGAGAACAGTGGCAAAGGAGGCTAAGGAAGAAGGTTCTGATGAGGATAAAAAGGATGTTGGTAGTAAGTCAAGAGGTGGTGGAAATGGGAGGAAGAAGAAAGAAGTAAAGGAGGTACCAACTGTTGGAGAAAATGGCTCAGAGAAAAAAGATGAAGGTTTTGCTCCCGACAGGCCTAGGAGGTCGGTGCGAAGTGCTACCACTAGAGCTTCTAATGAGGAGAAAGATTATGACGAGAAAAAAATCAGGTCAAAGAAAATTTTTGATGAGAATGGGATCAAGATTGATTCTGATATGTGCCATCAGTGTCAAAGGAATGACAAGGGAGATGTGATCAGGTGCACTAGATGTAAGACCAAACGTTTTTGTAAGCCCTGCATCCAAAACTGGTATCCCCGGATGACAGATGAACAGATTGCTCAAGCCTGCCCAGTCTGCCTTATGAACTGCAACTGCAAGGCATGCTTGCGAGCAGAGGGACCTGTCAAAAAACTGTTGGAGGCAAAGTTTGAGGTTAGAAAAGAAGAAAAGATTGAGCATTCCAAGAATTTGCTGAAGGGTATTTTGCCTTATGTGAAGCAATTTAATGAGGAACAAATGATGGAGAAGGAGGTAGAGGCCAAAATTCAGGGTGTACCACTATCTGAACTAAAAGTCCCATCAGCAAATTGTGATGCAGATGAGCGTATTTACTGCAACAACTGCAGAACTTCCATTTTCGATTTCCACAGAAGTTGCCCAAACTGCCAATATGATTTGTGTCTCACTTGCTGTCGAGAAATTCGTTCTGGACAGCTGCAGGGCAGTCAAGAGGAAGTCTTTATGGATTTTGCTGAGAGAGGGTTTAAGTATTTGCATGGTTTTGATTCTGATGACTCAGTAGAACCAGTGAAAAAACGTAGACTTCCTCGTCAGGCTAAGAAAAAAGCTACAGGTAGTGAAGCTGAGGAAAAACCTGCTGATAGTGAAGCTCAGGAAAAAACTGCATGTGGCCAAGCCAAGGAAAAATCTGAGTGGAAAGCAAATGACAATGGTACTATACAATGCCCACCCACAGCATATGGTGGTTGTAGTGGGAGCCTCCTTGAATTAAGATCTATTTTCTCAGATAGTTACATTGCAGAGTTATCGAATAAGGCAGAACAAATAGCAGCCACGTGGGAACTTGGGACTATATCCCTGCCACCTTCCTGTGGATGCTCATGTTCTGATTCTATGACTGATACTGGAATCGGAAGTAATACTCGGAAATGTGCTTCTAGAGAAGACTCCAATGACAACAACTTGTATTGCCCTGATTCCAGAGACCTCGAACATGGAGATCTGAAACATTTCCAATGGCATTGGGCCCGAGGGGAACCAGTAATTGTCGGGAATGTTCTTGAAACTGCGTTTGGTTTAAGCTGGGAGCCAATGGTCATGTGGCGTGCTGTCCGTCAAATTAGAAACACCAATCATTCCACACTATTGGATGTGAAAGCCATTGATTGCCTGGATTGGTGTGAGGTTGATGTCAATGTTCACCAATTTTTCAGTGGATATTCGAAGTGTCAGTTTGACTCTGCTGGCTGGCCTACCATACTAAAATTGAAAGATTGGCCACCTGGTACTGAATTTGAAAAGCAGTTGCCACGCCATGGTGCTGAATTTATTCATGCTTTGCCGTTTAAGCAGTATACACATCCCCGAGATGGCATTCTGAACCTTGCCGCTAAGTGGCCGGTAAACACGTTGAAGCCTGACTTAGGCCCCAAAACATATATTGCTTATGGGCTTCCTCAAGAGTTGGGTCGTGGTGATTCTGTTACGAAGCTTCATTGTGATATGTCTGACGCTGTCAATATTCTGACTCATACGGCAGAACTCTCTCTTAATGCTGTACAACTTCAGAAGGTTTCCAATTTGAAGAAGCGCCACATTCGTCAAGACCAACGGGAATTCTTTGGCATTGAATTACCAATGGAAAAGAGTGGCAGTGGCCAAGGAGATATGTTAGAGCAAGCTAGTTCCCGAAAAAGGCCTGGTAAACGAAAAAAAGATGAGTTGTCAGAGTTCCCTATTGAACAGAAAAATAGCAACAGTGGAATGTCTGATCCATCACCTACAGAGAGTGACAAAGTACTTCAGGTTGAACATTCAAATGAAGTCACTGAATTTTGCAAAGGAGAAATGTTAGACAACAAAGCGGTAGAAGGTGTTTCTAGAAAGATCAATGACACCATTGTCAACGTCAAATTAGGAGAATTAGATTCTGACAAGTGTTGTGGGAATGAAGGCTCTCTTCATACTGATGGGACTGGTGGTTCAGAGGGTGAGATGGTGCACAAAGCAGTTGAATGCCTGTCTGAAAAGGTGGATCAAGCCATTGCCAAAGTTGAAATAGGAGAAGAAAATCTGGATACACTTAATGGGAGTGAAGTCTCAGCTGCTGCATCCCACAGCTCTGATGGTACGGAGCATGAGACGGTTGACGATGGAAAGGTGGAAGGTTTGTGTGAAAAAATAAAAGAAGTCAATGACCATGTACAATTAGGAAAAGTAGATCTTGATCACTGTAGTGGAAGTGGAGCCTCAGCTCATGCTTTTGGTAGTTTTGATGGTTTAGAGCATAAGGATGGAGGTGCACTTTGGGACATCTTCCGGAGAGAGGATACCCCTAAACTGCAAGAGTATCTTAGAAAACACTATCGAGAATTTCGGCACATTCATTGTTCTCCTCTGAAACAGGTTGTTGACCCTATTCATGATCAGACATTCTACTTGACTGAGGACCATAAAAGGAAGCTCAAGGAAGAATATGGAATTGAGCCATGGACGTTTGTTCAGAAGCTTGGAGAAGCAGTCTTTATTCCTGCTGGCTGTCCTCACCAAGTAAGAAACTTGAAGTCATGCATCAAAGTTGCACTTGATTTTGTGTCACCAGAGAACATTAGTGAATGTATCCGGCTATCAGGGGAGTTCCGTGTTCTGCCTCACAATCACAGGGCTAAGGAGGATAAGTTGGAAGTGAAGAAAATGACTATCCATGCTGCGACACAACTTGTTGAAGACTTGAAGGAGTTTCTTCCTAGTTCTGATGCTGGCAAAAATGTGGTGGAAACTGAGAAGGGACAGCCCAGTTCTGTCCCTGAGTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_41007.p1 GENE.S_Transcript_41007~~S_Transcript_41007.p1 ORF type:complete len:1487 (+),score=497.95,JmjC|PF02373.18|4e-15,WRC|PF08879.6|7.3e-11,zf-4CXXC_R1|PF10497.5|1.6e+03,zf-4CXXC_R1|PF10497.5|7.1e-06,zf-4CXXC_R1|PF10497.5|1.6e+03,zf-4CXXC_R1|PF10497.5|9.7e+03 S_Transcript_41007:313-4773(+)
MEEHRKKKNNDSSNGKVSEDGSSKKKPSKGDEVKVPPDHERCERNDGKVWRCKKPKVEGEKMCLHHLKKKPDERKIEETKEKIVYTRRKCNHKVVEIGEEKIETRNPKIEEGEKEARNPRKRGRKAGKKKIEGDVDESESKRSCKTEGKQVEEEKESLLRVKEEEMVVEDVQGEKQVEGNKEDNSKANEDEMSVDGEKQVEEKEGHSKANEDEMSVDGAEGDKKVEENKEDHSKVNEEEMRVEGEKQVEEEKEEGLARVKEEEMGVEGEKEVEEDKEVHSKEKEEEKDNEGVEGEKEVEKEKEGHSKVNEEEMGVAGEKQVVEEKESCLRVKVEEMGNEGVEDEKQVGEEEEREESVWKAKEEVGLEGDKQVEEEKGREEIVLKAKEVSVEGEKQVETEKRKRRSCSQKAKEVGIDDDIEDEDKDDERKSTKKRRGRGCKRGGRTVAKEAKEEGSDEDKKDVGSKSRGGGNGRKKKEVKEVPTVGENGSEKKDEGFAPDRPRRSVRSATTRASNEEKDYDEKKIRSKKIFDENGIKIDSDMCHQCQRNDKGDVIRCTRCKTKRFCKPCIQNWYPRMTDEQIAQACPVCLMNCNCKACLRAEGPVKKLLEAKFEVRKEEKIEHSKNLLKGILPYVKQFNEEQMMEKEVEAKIQGVPLSELKVPSANCDADERIYCNNCRTSIFDFHRSCPNCQYDLCLTCCREIRSGQLQGSQEEVFMDFAERGFKYLHGFDSDDSVEPVKKRRLPRQAKKKATGSEAEEKPADSEAQEKTACGQAKEKSEWKANDNGTIQCPPTAYGGCSGSLLELRSIFSDSYIAELSNKAEQIAATWELGTISLPPSCGCSCSDSMTDTGIGSNTRKCASREDSNDNNLYCPDSRDLEHGDLKHFQWHWARGEPVIVGNVLETAFGLSWEPMVMWRAVRQIRNTNHSTLLDVKAIDCLDWCEVDVNVHQFFSGYSKCQFDSAGWPTILKLKDWPPGTEFEKQLPRHGAEFIHALPFKQYTHPRDGILNLAAKWPVNTLKPDLGPKTYIAYGLPQELGRGDSVTKLHCDMSDAVNILTHTAELSLNAVQLQKVSNLKKRHIRQDQREFFGIELPMEKSGSGQGDMLEQASSRKRPGKRKKDELSEFPIEQKNSNSGMSDPSPTESDKVLQVEHSNEVTEFCKGEMLDNKAVEGVSRKINDTIVNVKLGELDSDKCCGNEGSLHTDGTGGSEGEMVHKAVECLSEKVDQAIAKVEIGEENLDTLNGSEVSAAASHSSDGTEHETVDDGKVEGLCEKIKEVNDHVQLGKVDLDHCSGSGASAHAFGSFDGLEHKDGGALWDIFRREDTPKLQEYLRKHYREFRHIHCSPLKQVVDPIHDQTFYLTEDHKRKLKEEYGIEPWTFVQKLGEAVFIPAGCPHQVRNLKSCIKVALDFVSPENISECIRLSGEFRVLPHNHRAKEDKLEVKKMTIHAATQLVEDLKEFLPSSDAGKNVVETEKGQPSSVPE*

Click here to download the sequence:
Link to NCBI Protein BLAST