Transcript Information: S_Transcript_41008.p1


Annotated TAIR IDAT1G11950.1
Annotated Gene NameTranscription factor jumonji (jmjC) domain-containing protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:4034747-4038310 | Reverse length=875
E-Value6E-71
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 17.7946028722286
Replicate 26.6465307453601
Replicate 37.4542606932043
Condition 2: 8 Hour
Replicate 18.8335298803187
Replicate 28.8738546068874
Replicate 38.0982383369553
Condition 3: 24 Hour
Replicate 17.9519031953209
Replicate 27.7758684069476
Replicate 37.2183591519244


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_41008.p1 GENE.S_Transcript_41008~~S_Transcript_41008.p1 ORF type:complete len:1195 (+),score=353.23,JmjC|PF02373.18|3.1e-15,zf-4CXXC_R1|PF10497.5|3.1e-06,zf-4CXXC_R1|PF10497.5|1.2e+03,zf-4CXXC_R1|PF10497.5|6.1e+03 S_Transcript_41008:34-3585(+)
ATGGAAGAAGAGATGGAAAACCCTAGGAAAATGGAAGAAGAGATGGAAAACCCTAGGAAAATGGAAGAACAGATTGAAAATCGTAGGAAAATGGAAGAAGACATTGAAAACCATAGGAAAATGGAAGAAGAGAAGAACCCTAGGAAAAGGGGTAGGAAGGCTGTTGATAAAAACAAGGATGAAAACAAAAGGAGCAATGAAAGTGCTGTGGGTGAGAGACAGGTTGAAGAAAAAGAGAAACAAGAGATTAATGGAGGTGTTGAGGTTGAAGAACAAGTTGAAGAAGAAAAGGTGAAAGAAGTGGGTAATGAAAGCGTTGAGGGTGAGAAACTAGTGGAAAAGGAGACGAGAATGAGGAGGAGCTGTGTTCAAAAGGGGAAAGATGAAGGCTTTGTTTATAAGGACGAGATAGAAGAAGATGAGGATGATGAGGCGAGAAAGGTTTTTACGAAGCGAAAGGGGCCAAAGAAGGGACGGGGTGGGAAAACTGCGGCAAAGGAGGATGGGAGAAGAAAAAAGAAACATGATGTTGAGAAGCGTACAACAAGTGCTGTGGAAAATGGCGAAGAGAAGAAATATGTTGAAGGGTGTGTTTCTGAAGGGCTTAGGAGGTCTGGCAGGAGTAGTGTCAGTAAAGTTTGTTATGAGGAGAAAAAACCCAAGACAAGGATTAATATACTTGATGAAAATGGGATCAAGATTGATTCAACTATGTGCCATCAGTGTCAAAGGAATGACAAGGGAGATGTGATCAGGTGCACTAGATGTAAGACCAAACGTTTTTGTAAGCCCTGCATCCAAAACTGGTATCCCCGGATGACAGATGAACAGATTGCTCAAGCCTGCCCAGTCTGCCTTATGAACTGCAACTGCAAGGCATGCTTGCGAGCAGAGGGACCTGTCAAAAAACTGTTGGAGGCAAAGTTTGAGGTTAGAAAAGAAGAAAAGATTGAGCATTCCAAGAATTTGCTGAAGGGTATTTTGCCTTATGTGAAGCAATTTAATGAGGAACAAATGATGGAGAAGGAGGTAGAGGCCAAAATTCAGGGTGTACCACTATCTGAACTAAAAGTCCCATCAGCAAATTGTGATGCAGATGAGCGTATTTACTGCAACAACTGCAGAACTTCCATTTTCGATTTCCACAGAAGTTGCCCAAACTGCCAATATGATTTGTGTCTCACTTGCTGTCGAGAAATTCGTTCTGGACAGCTGCAGGGCAGTCAAGAGGAAGTCTTTATGGATTTTGCTGAGAGAGGGTTTAAGTATTTGCATGGTTTTGATTCTGATGACTCAGTAGAACCAGTGAAAAAACGTAGACTTCCTCGTCAGGCTAAGAAAAAAGCTACAGGTAGTGAAGCTGAGGAAAAACCTGCTGATAGTGAAGCTCAGGAAAAAACTGCATGTGGCCAAGCCAAGGAAAAATCTGAGTGGAAAGCAAATGACAATGGTACTATACAATGCCCACCCACAGCATATGGTGGTTGTAGTGGGAGCCTCCTTGAATTAAGATCTATTTTCTCAGATAGTTACATTGCAGAGTTATCGAATAAGGCAGAACAAATAGCAGCCACGTGGGAACTTGGGACTATATCCCTGCCACCTTCCTGTGGATGCTCATGTTCTGATTCTATGACTGATACTGGAATCGGAAGTAATACTCGGAAATGTGCTTCTAGAGAAGACTCCAATGACAACAACTTGTATTGCCCTGATGCCAGAGACCTCGAGCATGGAGATCTGAAGCATTTCCAATGGCATTGGGCTCGGGGGGAACCAGTAATTGTCAGGGATGTTCTTGAAACTGTGTTTGGTTTAAGCTGGGAGCCAATGGTCATGTGGCGTGCTGTCCGTCAAATTAGAAACACCAATCATTCCACACTATTGGATGTGAAAGCCATTGATTGCCTGGATTGGTGTGAGGTTGATGTCAATGTTCACCAATTTTTCAGTGGATATTCGAAGTGTCAGTTTGACTCTGCTGGCTGGCCTACCATACTAAAATTGAAAGATTGGCCACCTGGTACTGAATTTGAAAAGCAGTTGCCACGCCATGGTGCTGAATTTATTCATGCTTTGCCGTTTAAGCAGTATACACATCCCCGAGATGGCATTCTGAACCTTGCCGCTAAGTGGCCGGTAAACACGTTGAAGCCTGACTTAGGCCCCAAAACATATATTGCTTATGGGCTTCCTCAAGAGTTGGGTCGTGGTGATTCTGTTACGAAGCTTCATTGTGATATGTCTGACGCTGTCAATATTCTGACTCATACGGCAGAACTCTCTCTTAATGCTGTACAACTTCAGAAGGTTTCCAATTTGAAGAAGCGCCACATTCGTCAAGACCAACGGGAATTCTTTGGCATTGAATTACCAATGGAAAAGAGTGGCAGTGGCCAAGGAGATATGTTAGAGCAAGCTAGTTCCCGAAAAAGGCCTGGTAAACGAAAAAAAGATGAGTTGTCAGAGTTCCCTATTGAACAGAAAAATAGCAACAGTGGAATGTCTGATCCATCACCTACAGAGAGTGACAAAGTACTTCAGGTTGAACATTCAAATGAAGTCACTGAATTTTGCAAAGGAGAAATGTTAGACAACAAAGCGGTAGAAGGTGTTTCTAGAAAGATCAATGACACCATTGTCAACGTCAAATTAGGAGAATTAGATTCTGACAAGTGTTGTGGGAATGAAGGCTCTCTTCATACTGATGGGACTGGTGGTTCAGAGGGTGAGATGGTGCACAAAGCAGTTGAATGCCTGTCTGAAAAGGTGGATCAAGCCATTGCCAAAGTTGAAATAGGAGAAGAAAATCTGGATACACTTAATGGGAGTGAAGTCTCAGCTGCTGCATCCCACAGCTCTGATGGTACGGAGCATGAGACGGTTGACGATGGAAAGGTGGAAGGTTTGTGTGAAAAAATAAAAGAAGTCAATGACCATGTACAATTAGGAAAAGTAGATCTTGATCACTGTAGTGGAAGTGGAGCCTCAGCTCATGCTTTTGGTAGTTTTGATGGTTTAGAGCATAAGGATGGAGGTGCACTTTGGGACATCTTCCGGAGAGAGGATACCCCTAAACTGCAAGAGTATCTTAGAAAACACTATCGAGAATTTCGGCACATTCATTGTTCTCCTCTGAAACAGGTTGTTGACCCTATTCATGATCAGACATTCTACTTGACTGAGGACCATAAAAGGAAGCTCAAGGAAGAATATGGAATTGAGCCATGGACGTTTGTTCAGAAGCTTGGAGAAGCAGTCTTTATTCCTGCTGGCTGTCCTCACCAAGTAAGAAACTTGAAGTCATGCATCAAAGTTGCACTTGATTTTGTGTCACCAGAGAACATTAGTGAATGTATCCGGCTATCAGGGGAGTTCCGTGTTCTGCCTCACAATCACAGGGCTAAGGAGGATAAGTTGGAAGTGAAGAAAATGACTATCCATGCTGCGACACAACTTGTTGAAGACTTGAAGGAGTTTCTTCCTAGTTCTGATGCTGGCAAAAATGTGGTGGAAACTGAGAAGGGACAGCCCAGTTCTGTCCCTGAGTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_41008.p1 GENE.S_Transcript_41008~~S_Transcript_41008.p1 ORF type:complete len:1195 (+),score=353.23,JmjC|PF02373.18|3.1e-15,zf-4CXXC_R1|PF10497.5|3.1e-06,zf-4CXXC_R1|PF10497.5|1.2e+03,zf-4CXXC_R1|PF10497.5|6.1e+03 S_Transcript_41008:34-3585(+)
MEEEMENPRKMEEEMENPRKMEEQIENRRKMEEDIENHRKMEEEKNPRKRGRKAVDKNKDENKRSNESAVGERQVEEKEKQEINGGVEVEEQVEEEKVKEVGNESVEGEKLVEKETRMRRSCVQKGKDEGFVYKDEIEEDEDDEARKVFTKRKGPKKGRGGKTAAKEDGRRKKKHDVEKRTTSAVENGEEKKYVEGCVSEGLRRSGRSSVSKVCYEEKKPKTRINILDENGIKIDSTMCHQCQRNDKGDVIRCTRCKTKRFCKPCIQNWYPRMTDEQIAQACPVCLMNCNCKACLRAEGPVKKLLEAKFEVRKEEKIEHSKNLLKGILPYVKQFNEEQMMEKEVEAKIQGVPLSELKVPSANCDADERIYCNNCRTSIFDFHRSCPNCQYDLCLTCCREIRSGQLQGSQEEVFMDFAERGFKYLHGFDSDDSVEPVKKRRLPRQAKKKATGSEAEEKPADSEAQEKTACGQAKEKSEWKANDNGTIQCPPTAYGGCSGSLLELRSIFSDSYIAELSNKAEQIAATWELGTISLPPSCGCSCSDSMTDTGIGSNTRKCASREDSNDNNLYCPDARDLEHGDLKHFQWHWARGEPVIVRDVLETVFGLSWEPMVMWRAVRQIRNTNHSTLLDVKAIDCLDWCEVDVNVHQFFSGYSKCQFDSAGWPTILKLKDWPPGTEFEKQLPRHGAEFIHALPFKQYTHPRDGILNLAAKWPVNTLKPDLGPKTYIAYGLPQELGRGDSVTKLHCDMSDAVNILTHTAELSLNAVQLQKVSNLKKRHIRQDQREFFGIELPMEKSGSGQGDMLEQASSRKRPGKRKKDELSEFPIEQKNSNSGMSDPSPTESDKVLQVEHSNEVTEFCKGEMLDNKAVEGVSRKINDTIVNVKLGELDSDKCCGNEGSLHTDGTGGSEGEMVHKAVECLSEKVDQAIAKVEIGEENLDTLNGSEVSAAASHSSDGTEHETVDDGKVEGLCEKIKEVNDHVQLGKVDLDHCSGSGASAHAFGSFDGLEHKDGGALWDIFRREDTPKLQEYLRKHYREFRHIHCSPLKQVVDPIHDQTFYLTEDHKRKLKEEYGIEPWTFVQKLGEAVFIPAGCPHQVRNLKSCIKVALDFVSPENISECIRLSGEFRVLPHNHRAKEDKLEVKKMTIHAATQLVEDLKEFLPSSDAGKNVVETEKGQPSSVPE*

Click here to download the sequence:
Link to NCBI Protein BLAST