Transcript Information: S_Transcript_41009.p1


Annotated TAIR IDAT3G07610.3
Annotated Gene NameTranscription factor jumonji (jmjC) domain-containing protein
Annotated Gene Symbol(s)IBM1
Annotation TypeOrtholog
Chromosome Positionchr3:2426148-2432876 | Forward length=1049
E-Value5.4E-70
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 14.4662595692883
Replicate 24.0545348354656
Replicate 33.363689036052
Condition 2: 8 Hour
Replicate 14.7915578798551
Replicate 25.5696904727197
Replicate 34.8041958887787
Condition 3: 24 Hour
Replicate 13.393379959704
Replicate 23.2219704390785
Replicate 33.7955503716437


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_41009.p1 GENE.S_Transcript_41009~~S_Transcript_41009.p1 ORF type:complete len:1442 (+),score=493.16,JmjC|PF02373.18|3.3e-15,WRC|PF08879.6|7e-11,zf-4CXXC_R1|PF10497.5|1.5e+03,zf-4CXXC_R1|PF10497.5|7.1e-07,zf-4CXXC_R1|PF10497.5|2e+03,zf-4CXXC_R1|PF10497.5|1e+04 S_Transcript_41009:313-4638(+)
ATGGAGGAACATAGAAAGAAGAAGAATAATGATAGTAGTAATGGAAAAGTATCAGAAGATGGTTCATCGAAGAAGAAGCCCTCGAAAGGGGATGAAGTGAAAGTTCCACCAGATCATGAGAGGTGTGAGAGAAACGATGGAAAGGTTTGGAGGTGTAAAAAACCTAAAGTGGAAGGTGAGAAGATGTGCCTTCATCATTTGAAGAAGAAACCAGACGAACGTAAAATTGAGGAGACGAAGGAGAAGATTGTTTATACACGCCGGAAATGTAATCATAAGGTGGTGGAAATTGGGGAGGAGAAAATTGAGACGAGAAACCCTAAAATTGAAGAAGGGGAAAAGGAGGCGAGAAACCCTAGAAAAAGGGGGCGTAAGGCTGGGAAGAAGAAAATTGAGGGTGATGTTGATGAGAGTGAGAGTAAAAGGAGCTGTAAGACTGAGGGGAAGCAAGTTGAAGAAGAAAAGGAGAGTCTTTTAAGGGTAAAAGAAGAAGAAATGGTGGTTGAAGATGTTCAGGGTGAGAAACAAGTTGAAGGAAACAAGGAGGATAATTCAAAAGCGAACGAGGATGAAATGAGTGTTGATGGTGAGAAACAAGTTGAAGAAAAGGAGGGTCATTCAAAAGCGAATGAGGATGAAATGAGTGTTGATGGTGCTGAGGGTGACAAAAAAGTTGAAGAAAACAAAGAGGATCATTCAAAAGTGAATGAGGAAGAAATGAGAGTTGAGGGTGAGAAACAAGTTGAAGAAGAAAAGGAAGAGGGACTTGCTAGGGTAAAAGAGGAAGAAATGGGTGTTGAAGGTGAGAAAGAAGTTGAAGAAGATAAGGAGGTCCATTCTAAGGAGAAAGAGGAAGAAAAGGATAATGAAGGTGTTGAGGGTGAAAAAGAAGTTGAAAAAGAAAAGGAGGGTCATTCAAAGGTGAACGAGGAAGAAATGGGTGTTGCAGGTGAGAAACAAGTTGTAGAAGAAAAAGAGAGTTGTTTAAGAGTCAAAGTGGAAGAAATGGGTAATGAAGGTGTTGAGGATGAGAAACAAGTTGGAGAAGAGGAAGAAAGAGAGGAAAGTGTGTGGAAGGCGAAAGAAGAAGTGGGTCTTGAGGGTGATAAACAAGTTGAAGAAGAGAAGGGAAGAGAGGAAATTGTTTTGAAGGCGAAAGAAGTGAGTGTCGAGGGTGAGAAACAAGTTGAGACAGAGAAGAGGAAGCGGAGGAGTTGTTCACAGAAGGCAAAAGAAGTGGGTATTGATGATGATATAGAAGATGAAGATAAAGATGACGAGAGGAAGTCAACTAAGAAGCGAAGGGGGCGAGGGTGTAAAAGGGGTGGGAGAACAGTGGCAAAGGAGGCTAAGGAAGAAGGTTCTGATGAGGATAAAAAGGATGTTGGTAGTAAGTCAAGAGGTGGTGGAAATGGGAGGAAGAAGAAAGAAGTAAAGGAGGTACCAACTGTTGGAGAAAATGGCTCAGAGAAAAAAGATGAAGGTTTTGCTCCCGACAGGCCTAGGAGGTCGGTGCGAAGTGCTACCACTAGAGCTTCTAATGAGGAGAAAGATTATGACGAGAAAAAAATCAGGTCAAAGAAAATTTTTGATGAGAATGGGATCAAGATTGATTCTGATATGTGCCATCAGTGTCAAAGGAATGACAAGGGAGAAGTGGTGAGGTGCACCAATTGTAAGACCAAGCGGTTTTGTATGCCCTGCATCCATAATTGGTATCCCCAACTGACAGTGGTGGAGATTGCTCGGGCCTGCCCATTCTGCCTTGGGAACTGCAACTGCAAGGCATGCTTGCGAGCCGAAGGAGCCGCCAAAAACAAGGTAAAGCTTAATATTAGCAAAGAACAAAAAGTTGAGCATTCCAAACACCTGCTGAAGAGTATTTTGCCCTTTGTGAACGAAATTAATGAGGAACAGATGAAGGAAAAGGAGATAGAGGCTAAAATCCAGGGTGTATCACTATCTGAAATAGAACTCCCAAAAGCAATATGTGGGAAAAATGAGCGTATGTACTGTGACAACTGCAGAAGTTCAATTTTTGATTTTCACCGAAGTTGCCCAAACTGCGAATATGATTTATGTCTTGCTTGCTGCCGAGAATTTCGTGCTGGACAGCTTCCAGGTGGTAGGGAGGAAGTGATAATGGAATATATTGACAATGGATATGATTATTTGCATGGTGGTGAACCACAGGAAAAACCTAGAGCCAGCTCTCGTCTAGCCAAGGATATACCTGCTGGTACTGAAGCTGAAGAAGTACCTGCTGGTAGTCAAGCCAAGGGAAACCCTCCTGGTGGTCAAGCCAAGGAAAAACCTGAATGGAGAACAAACGATGATGGTAGTATACCCTGCCCACCAAAAGCATGTGGTGGTTGTGGTGGAAGTATTCTCCAACTTAAATCTGTTTTATCAGATGGTTGTATTTCAAAATTGTTGTGCCGCGGGGAGCTAATAGCGGCGACATGGAAACATGAGAGCATATCCCAGGCTCCTGATGGGTGCTCATGTTCCGATTCCATGAATGATTCTGGCAGTGAAAGTAATGTACGGAAGTGTGCTTCCAGGGAAGGCTCCAATGACAATTATTTGTATTCTCCTGATGCTAGAGAGCTTCAACAGCGAGACCTGAACCACTTCCAGTGGCATTGGGCTCGGGGTGAACCATTAATTGTCAGGCATGCTCTTGAAACTGCCACTGGTCTAAGCTGGGAGCCACTTGTCATGTGGCGTGCTGTCCGTCAAATTAGAAACACCAATCATTCCACACTATTGGATGTGAAAGCCATTGATTGCCTGGATTGGTGTGAGGTTGATATAAATGTTCACAAATTCTTTATTGGATATTCAAAGTGTGGGTTTGACCGTCTTGGCTGGCCTATCATACTGAAATTGAAAGATTGGCCACCTGGTACTGAATTTGAAAAGCAATTGCCACGCCATGGTGCCGAATTTATTTGTGCTTTGCCGTTTAAGGAGTACACTCATCCCAGAGAAGGCGTTCTGAACCTTGCTGCAAAGTGGGATAAAAAAACGCTGAAGCCAGACTTGGGCCCAAAAACTTATATTGCATATGGACTTCCTCAAGAGTTGGGGCGTGGCGATTCTGTTACCAAACTTCATTGTGATATGTCTGATGCGGTCAATATTTTGGCACATACTGCTGAACTCACTTTGGACGATGCAAAACTTAGCGAGGTTTACAAATTGAAGCGGAAACATTTTGATCAGGATCAAAAGGAATTCTTTGGCATCGAGTTGCCCAAGGAGAATAAAGTTGGTGGTCAAAAACAGAAGACAGATCAAACCAAGTCTAGAAAGGGTTCTCGAAAAAATAGACCTGAAAATTTGGATGAGGCTCCTGATTGTTGCAAGAGAGAAATGTTGGATGAAGAAATGGAAAAATGCTTATCTGAAAAGGGTGATGAATCAATGGCTGATGTCCAAGTAGGAAAAGTAGATCTCGGAAAATGTAGTGGGAATGAAAGCTCACCTCGTGCAGTTGGGAGCTCTGATAGTTCAGAGCAAGAGCTTGTGCACAAAGGAACAGTAGAAGGCATGTCTGAAAAGATTGTTGATACCATTTCCGATCCTGATCTGCCAAACAGGAGTGATGTCTCAGCTCCTGCATGTGGGAGTTCTGGTTGGTCAGAGCATGAGATGGTAGACAATGAAAAGACGGAAGGTGTGGGTGGAGAAGTTAATGAAACAAATGAATATTTGCAATCAGGAAAAGTCGAGGTTGACTGCAATGTCAATGGGGCCCCTGCTCATTCATTTGGAAGTTTTGATGGTTTGGAGCACAAAGATGGAGGTGCTCTTTGGGACATCTTCCGAAGAGAAGATACCCCTAAGCTGCAGGAATATCTTAAAAAACACTATCGTGAATTCCGTCATATCCATTGTGCTCCTTTGAAACAGGTTATTGACCCTATCCATGATCAGACATTCTACTTGACTGAGGACCATAAAAGGAAGCTCAAGGAAGAATATGGAATTGAGCCATGGACGTTTGTTCAGAAGCTTGGAGAAGCAGTCTTTATTCCTGCTGGCTGTCCTCACCAAGTAAGAAACTTGAAGTCATGCATCAAAGTTGCACTTGATTTTGTGTCACCAGAGAACATTAGTGAATGTATCCGGCTATCAGGGGAGTTCCGTGTTCTGCCTCACAATCACAGGGCTAAGGAGGATAAGTTGGAAGTGAAGAAAATGACTATCCATGCTGCGACACAACTTGTTGAAGACTTGAAGGAGTTTCTTCCTAGTTCTGATGCTGGCAAAAATGTGGTGGAAACTGAGAAGGGACAGCCCAGTTCTGTCCCTGAGTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_41009.p1 GENE.S_Transcript_41009~~S_Transcript_41009.p1 ORF type:complete len:1442 (+),score=493.16,JmjC|PF02373.18|3.3e-15,WRC|PF08879.6|7e-11,zf-4CXXC_R1|PF10497.5|1.5e+03,zf-4CXXC_R1|PF10497.5|7.1e-07,zf-4CXXC_R1|PF10497.5|2e+03,zf-4CXXC_R1|PF10497.5|1e+04 S_Transcript_41009:313-4638(+)
MEEHRKKKNNDSSNGKVSEDGSSKKKPSKGDEVKVPPDHERCERNDGKVWRCKKPKVEGEKMCLHHLKKKPDERKIEETKEKIVYTRRKCNHKVVEIGEEKIETRNPKIEEGEKEARNPRKRGRKAGKKKIEGDVDESESKRSCKTEGKQVEEEKESLLRVKEEEMVVEDVQGEKQVEGNKEDNSKANEDEMSVDGEKQVEEKEGHSKANEDEMSVDGAEGDKKVEENKEDHSKVNEEEMRVEGEKQVEEEKEEGLARVKEEEMGVEGEKEVEEDKEVHSKEKEEEKDNEGVEGEKEVEKEKEGHSKVNEEEMGVAGEKQVVEEKESCLRVKVEEMGNEGVEDEKQVGEEEEREESVWKAKEEVGLEGDKQVEEEKGREEIVLKAKEVSVEGEKQVETEKRKRRSCSQKAKEVGIDDDIEDEDKDDERKSTKKRRGRGCKRGGRTVAKEAKEEGSDEDKKDVGSKSRGGGNGRKKKEVKEVPTVGENGSEKKDEGFAPDRPRRSVRSATTRASNEEKDYDEKKIRSKKIFDENGIKIDSDMCHQCQRNDKGEVVRCTNCKTKRFCMPCIHNWYPQLTVVEIARACPFCLGNCNCKACLRAEGAAKNKVKLNISKEQKVEHSKHLLKSILPFVNEINEEQMKEKEIEAKIQGVSLSEIELPKAICGKNERMYCDNCRSSIFDFHRSCPNCEYDLCLACCREFRAGQLPGGREEVIMEYIDNGYDYLHGGEPQEKPRASSRLAKDIPAGTEAEEVPAGSQAKGNPPGGQAKEKPEWRTNDDGSIPCPPKACGGCGGSILQLKSVLSDGCISKLLCRGELIAATWKHESISQAPDGCSCSDSMNDSGSESNVRKCASREGSNDNYLYSPDARELQQRDLNHFQWHWARGEPLIVRHALETATGLSWEPLVMWRAVRQIRNTNHSTLLDVKAIDCLDWCEVDINVHKFFIGYSKCGFDRLGWPIILKLKDWPPGTEFEKQLPRHGAEFICALPFKEYTHPREGVLNLAAKWDKKTLKPDLGPKTYIAYGLPQELGRGDSVTKLHCDMSDAVNILAHTAELTLDDAKLSEVYKLKRKHFDQDQKEFFGIELPKENKVGGQKQKTDQTKSRKGSRKNRPENLDEAPDCCKREMLDEEMEKCLSEKGDESMADVQVGKVDLGKCSGNESSPRAVGSSDSSEQELVHKGTVEGMSEKIVDTISDPDLPNRSDVSAPACGSSGWSEHEMVDNEKTEGVGGEVNETNEYLQSGKVEVDCNVNGAPAHSFGSFDGLEHKDGGALWDIFRREDTPKLQEYLKKHYREFRHIHCAPLKQVIDPIHDQTFYLTEDHKRKLKEEYGIEPWTFVQKLGEAVFIPAGCPHQVRNLKSCIKVALDFVSPENISECIRLSGEFRVLPHNHRAKEDKLEVKKMTIHAATQLVEDLKEFLPSSDAGKNVVETEKGQPSSVPE*

Click here to download the sequence:
Link to NCBI Protein BLAST